Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1029 and HP15_1030 are separated by 164 nucleotides HP15_1030 and HP15_1031 are separated by 1 nucleotides HP15_1031 and HP15_1032 overlap by 4 nucleotides
HP15_1029: HP15_1029 - conserved hypothetical protein, membrane, at 1,046,645 to 1,047,925
_1029
HP15_1030: HP15_1030 - sulfate permease family protein, at 1,048,090 to 1,049,577
_1030
HP15_1031: HP15_1031 - UspA domain protein, at 1,049,579 to 1,050,505
_1031
HP15_1032: HP15_1032 - phospholipase, patatin family, at 1,050,502 to 1,051,368
_1032
Position (kb)
1048
1049
1050 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1047.090 kb on + strand, within HP15_1029 at 1047.090 kb on + strand, within HP15_1029 at 1047.103 kb on - strand, within HP15_1029 at 1047.112 kb on - strand, within HP15_1029 at 1047.210 kb on - strand, within HP15_1029 at 1047.599 kb on + strand, within HP15_1029 at 1047.599 kb on + strand, within HP15_1029 at 1047.607 kb on - strand, within HP15_1029 at 1047.649 kb on - strand, within HP15_1029 at 1047.687 kb on + strand, within HP15_1029 at 1047.692 kb on + strand, within HP15_1029 at 1047.772 kb on - strand, within HP15_1029 at 1047.777 kb on - strand, within HP15_1029 at 1047.819 kb on - strand at 1047.822 kb on + strand at 1047.830 kb on - strand at 1047.830 kb on - strand at 1047.875 kb on + strand at 1047.920 kb on + strand at 1047.949 kb on - strand at 1048.148 kb on - strand at 1048.509 kb on - strand, within HP15_1030 at 1048.593 kb on + strand, within HP15_1030 at 1048.606 kb on + strand, within HP15_1030 at 1048.644 kb on + strand, within HP15_1030 at 1048.734 kb on + strand, within HP15_1030 at 1048.766 kb on - strand, within HP15_1030 at 1048.784 kb on - strand, within HP15_1030 at 1048.846 kb on - strand, within HP15_1030 at 1048.848 kb on + strand, within HP15_1030 at 1048.867 kb on + strand, within HP15_1030 at 1048.867 kb on + strand, within HP15_1030 at 1048.867 kb on + strand, within HP15_1030 at 1048.875 kb on - strand, within HP15_1030 at 1048.875 kb on - strand, within HP15_1030 at 1048.875 kb on - strand, within HP15_1030 at 1048.907 kb on - strand, within HP15_1030 at 1049.180 kb on + strand, within HP15_1030 at 1049.195 kb on + strand, within HP15_1030 at 1049.208 kb on - strand, within HP15_1030 at 1049.232 kb on - strand, within HP15_1030 at 1049.314 kb on + strand, within HP15_1030 at 1049.439 kb on + strand at 1049.442 kb on - strand at 1049.447 kb on - strand at 1049.447 kb on - strand at 1049.447 kb on - strand at 1050.010 kb on - strand, within HP15_1031 at 1050.027 kb on - strand, within HP15_1031 at 1050.034 kb on - strand, within HP15_1031 at 1050.179 kb on + strand, within HP15_1031 at 1050.187 kb on - strand, within HP15_1031 at 1050.247 kb on + strand, within HP15_1031 at 1050.255 kb on - strand, within HP15_1031 at 1050.270 kb on + strand, within HP15_1031 at 1050.288 kb on - strand, within HP15_1031 at 1050.457 kb on - strand at 1050.530 kb on + strand at 1050.530 kb on + strand at 1050.530 kb on + strand at 1050.543 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,047,090 + HP15_1029 0.35 +0.3 1,047,090 + HP15_1029 0.35 +0.3 1,047,103 - HP15_1029 0.36 +0.6 1,047,112 - HP15_1029 0.36 -0.3 1,047,210 - HP15_1029 0.44 +0.2 1,047,599 + HP15_1029 0.74 +0.0 1,047,599 + HP15_1029 0.74 -0.1 1,047,607 - HP15_1029 0.75 -0.8 1,047,649 - HP15_1029 0.78 +0.1 1,047,687 + HP15_1029 0.81 -0.3 1,047,692 + HP15_1029 0.82 -0.2 1,047,772 - HP15_1029 0.88 +0.4 1,047,777 - HP15_1029 0.88 -0.2 1,047,819 - -0.7 1,047,822 + -0.9 1,047,830 - +0.7 1,047,830 - -0.7 1,047,875 + -0.5 1,047,920 + +0.0 1,047,949 - -1.7 1,048,148 - -2.7 1,048,509 - HP15_1030 0.28 -0.8 1,048,593 + HP15_1030 0.34 -0.5 1,048,606 + HP15_1030 0.35 -1.6 1,048,644 + HP15_1030 0.37 -1.2 1,048,734 + HP15_1030 0.43 +0.8 1,048,766 - HP15_1030 0.45 -1.1 1,048,784 - HP15_1030 0.47 +0.4 1,048,846 - HP15_1030 0.51 -0.7 1,048,848 + HP15_1030 0.51 -0.5 1,048,867 + HP15_1030 0.52 +0.4 1,048,867 + HP15_1030 0.52 -1.2 1,048,867 + HP15_1030 0.52 +0.0 1,048,875 - HP15_1030 0.53 -1.9 1,048,875 - HP15_1030 0.53 -1.1 1,048,875 - HP15_1030 0.53 +0.4 1,048,907 - HP15_1030 0.55 -1.2 1,049,180 + HP15_1030 0.73 -0.5 1,049,195 + HP15_1030 0.74 -2.3 1,049,208 - HP15_1030 0.75 -1.2 1,049,232 - HP15_1030 0.77 -1.3 1,049,314 + HP15_1030 0.82 -2.9 1,049,439 + +0.1 1,049,442 - -2.2 1,049,447 - +0.7 1,049,447 - -0.4 1,049,447 - -0.5 1,050,010 - HP15_1031 0.46 -1.4 1,050,027 - HP15_1031 0.48 -0.2 1,050,034 - HP15_1031 0.49 -0.1 1,050,179 + HP15_1031 0.65 +0.1 1,050,187 - HP15_1031 0.66 -1.8 1,050,247 + HP15_1031 0.72 -0.6 1,050,255 - HP15_1031 0.73 -0.3 1,050,270 + HP15_1031 0.75 -0.0 1,050,288 - HP15_1031 0.76 +0.1 1,050,457 - +0.7 1,050,530 + -0.3 1,050,530 + -3.0 1,050,530 + -0.3 1,050,543 - +0.9
Or see this region's nucleotide sequence