Strain Fitness in Shewanella amazonensis SB2B around Sama_0854

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,039,130	-		Sama_0852	0.14	+0.1
1,039,163	+		Sama_0852	0.19	-1.7
1,039,163	+		Sama_0852	0.19	+0.9
1,039,164	-		Sama_0852	0.19	+2.1
1,039,164	-		Sama_0852	0.19	+0.9
1,039,164	-		Sama_0852	0.19	-1.9
1,039,164	-		Sama_0852	0.19	-2.0
1,039,164	-		Sama_0852	0.19	+0.1
1,039,180	+		Sama_0852	0.22	+2.1
1,039,182	+		Sama_0852	0.22	+0.6
1,039,183	-		Sama_0852	0.22	+0.5
1,039,183	-		Sama_0852	0.22	-1.0
1,039,183	-		Sama_0852	0.22	+0.8
1,039,183	-		Sama_0852	0.22	-0.3
1,039,215	+		Sama_0852	0.28	-1.0
1,039,216	-		Sama_0852	0.28	+0.9
1,039,256	+		Sama_0852	0.34	-0.6
1,039,256	+		Sama_0852	0.34	-2.4
1,039,256	+		Sama_0852	0.34	-1.0
1,039,256	+		Sama_0852	0.34	-3.8
1,039,257	-		Sama_0852	0.34	+0.5
1,039,257	-		Sama_0852	0.34	-0.7
1,039,257	-		Sama_0852	0.34	+0.8
1,039,257	-		Sama_0852	0.34	+0.2
1,039,257	-		Sama_0852	0.34	+0.3
1,039,322	-		Sama_0852	0.45	+0.3
1,039,352	+		Sama_0852	0.50	-2.4
1,039,353	-		Sama_0852	0.50	+2.9
1,039,361	-		Sama_0852	0.51	-0.7
1,039,361	-		Sama_0852	0.51	-0.3
1,039,361	-		Sama_0852	0.51	+1.3
1,039,364	+		Sama_0852	0.51	-0.7
1,039,364	+		Sama_0852	0.51	+0.3
1,039,364	+		Sama_0852	0.51	-1.1
1,039,365	-		Sama_0852	0.52	-0.7
1,039,365	-		Sama_0852	0.52	+1.3
1,039,365	-		Sama_0852	0.52	+3.3
1,039,365	-		Sama_0852	0.52	+0.2
1,039,365	-		Sama_0852	0.52	-1.5
1,039,401	+		Sama_0852	0.57	-0.7
1,039,401	+		Sama_0852	0.57	-0.6
1,039,401	+		Sama_0852	0.57	+0.2
1,039,401	+		Sama_0852	0.57	-0.4
1,039,402	-		Sama_0852	0.58	+0.3
1,039,402	-		Sama_0852	0.58	+1.3
1,039,402	-		Sama_0852	0.58	-0.0
1,039,415	-		Sama_0852	0.60	-1.7
1,039,442	-		Sama_0852	0.64	-2.2
1,039,442	-		Sama_0852	0.64	+0.2
1,039,473	+		Sama_0852	0.69	+5.7
1,039,473	+		Sama_0852	0.69	+0.5
1,039,473	+		Sama_0852	0.69	-0.7
1,039,474	-		Sama_0852	0.69	+1.3
1,039,531	+		Sama_0852	0.78	+2.3
1,039,532	-		Sama_0852	0.78	-1.2
1,039,690	-				+0.1
1,039,742	+		Sama_0853	0.20	-0.6
1,039,742	+		Sama_0853	0.20	-1.0
1,039,743	-		Sama_0853	0.21	+0.7
1,039,788	+		Sama_0853	0.32	+0.5
1,039,788	+		Sama_0853	0.32	-0.2
1,039,788	+		Sama_0853	0.32	+2.0
1,039,788	+		Sama_0853	0.32	+0.5
1,039,789	-		Sama_0853	0.32	-0.9
1,039,789	-		Sama_0853	0.32	-0.7
1,039,789	-		Sama_0853	0.32	-1.0
1,039,789	-		Sama_0853	0.32	-1.5
1,039,789	-		Sama_0853	0.32	-2.2
1,039,789	-		Sama_0853	0.32	+1.5
1,039,802	+		Sama_0853	0.36	-1.0
1,039,802	+		Sama_0853	0.36	+4.4
1,039,802	+		Sama_0853	0.36	-0.3
1,039,803	-		Sama_0853	0.36	-0.5
1,039,803	-		Sama_0853	0.36	-1.0
1,039,803	-		Sama_0853	0.36	-1.0
1,039,803	-		Sama_0853	0.36	-0.7
1,039,968	+		Sama_0853	0.78	+0.3
1,039,968	+		Sama_0853	0.78	-1.4
1,039,968	+		Sama_0853	0.78	-1.9
1,039,968	+		Sama_0853	0.78	+0.5
1,039,968	+		Sama_0853	0.78	+2.9
1,039,974	+		Sama_0853	0.80	-2.0
1,039,974	+		Sama_0853	0.80	+2.4
1,039,974	+		Sama_0853	0.80	-1.7
1,039,974	+		Sama_0853	0.80	-1.3
1,039,974	+		Sama_0853	0.80	-1.7
1,039,974	+		Sama_0853	0.80	-0.7
1,039,974	+		Sama_0853	0.80	-1.0
1,039,974	+		Sama_0853	0.80	+3.5
1,039,974	+		Sama_0853	0.80	+0.3
1,039,974	+		Sama_0853	0.80	-0.7
1,039,975	-		Sama_0853	0.80	-1.7
1,039,975	-		Sama_0853	0.80	-0.4
1,039,975	-		Sama_0853	0.80	-2.7
1,039,975	-		Sama_0853	0.80	+0.9
1,039,976	+		Sama_0853	0.80	-0.1
1,039,977	-		Sama_0853	0.81	-0.3
1,039,977	-		Sama_0853	0.81	-2.2
1,039,977	-		Sama_0853	0.81	+1.3
1,040,034	+				+2.6
1,040,034	+				+0.5
1,040,034	+				-0.6
1,040,047	+				+0.3
1,040,047	+				-0.7
1,040,102	+				-1.9
1,040,102	+				+1.3
1,040,102	+				+1.2
1,040,102	+				-2.4
1,040,102	+				-2.9
1,040,102	+				+0.4
1,040,103	-				-1.5
1,040,103	-				-0.3
1,040,104	+				+0.3
1,040,104	+				+1.5
1,040,105	-				-1.0
1,040,105	-				+1.6
1,040,105	-				+1.3
1,040,105	-				-0.7
1,040,105	-				-0.7
1,040,124	+				+0.7
1,040,125	-				+1.3
1,040,140	-				+0.3
1,040,140	-				-1.0
1,040,165	+				-1.5
1,040,165	+				-1.0
1,040,216	+				-0.0
1,040,216	+				-2.7
1,040,265	+		Sama_0854	0.14	+2.3
1,040,266	+		Sama_0854	0.14	+1.0
1,040,266	+		Sama_0854	0.14	-0.7
1,040,266	+		Sama_0854	0.14	-2.1
1,040,266	+		Sama_0854	0.14	+1.4
1,040,266	+		Sama_0854	0.14	+0.3
1,040,267	-		Sama_0854	0.15	-0.8
1,040,270	+		Sama_0854	0.15	+1.6
1,040,270	+		Sama_0854	0.15	+0.9
1,040,270	+		Sama_0854	0.15	-2.2
1,040,270	+		Sama_0854	0.15	-1.8
1,040,270	+		Sama_0854	0.15	-2.3
1,040,271	-		Sama_0854	0.15	-2.0
1,040,292	+		Sama_0854	0.17	-1.0
1,040,293	-		Sama_0854	0.17	-2.4
1,040,293	-		Sama_0854	0.17	-0.7
1,040,340	+		Sama_0854	0.22	+0.1
1,040,340	+		Sama_0854	0.22	+1.1
1,040,340	+		Sama_0854	0.22	-0.0
1,040,340	+		Sama_0854	0.22	-0.0
1,040,340	+		Sama_0854	0.22	-1.5
1,040,340	+		Sama_0854	0.22	+1.0
1,040,341	-		Sama_0854	0.22	+1.4
1,040,341	-		Sama_0854	0.22	+0.1
1,040,341	-		Sama_0854	0.22	-1.6
1,040,341	-		Sama_0854	0.22	-2.0
1,040,398	+		Sama_0854	0.28	+0.4
1,040,457	+		Sama_0854	0.34	-0.3
1,040,457	+		Sama_0854	0.34	+1.3
1,040,457	+		Sama_0854	0.34	-1.0
1,040,458	-		Sama_0854	0.34	-0.0
1,040,478	-		Sama_0854	0.36	+0.4
1,040,478	-		Sama_0854	0.36	-1.5
1,040,616	+		Sama_0854	0.50	+0.4
1,040,616	+		Sama_0854	0.50	-0.9
1,040,616	+		Sama_0854	0.50	-0.7
1,040,617	-		Sama_0854	0.50	-2.0
1,040,672	+		Sama_0854	0.55	-0.8
1,040,673	-		Sama_0854	0.56	-1.3
1,040,673	-		Sama_0854	0.56	+0.6
1,040,673	-		Sama_0854	0.56	-1.5
1,040,697	+		Sama_0854	0.58	+0.2
1,040,697	+		Sama_0854	0.58	-0.8
1,040,697	+		Sama_0854	0.58	-0.3
1,040,697	+		Sama_0854	0.58	+0.3
1,040,697	+		Sama_0854	0.58	-2.5
1,040,697	+		Sama_0854	0.58	-1.0
1,040,799	+		Sama_0854	0.68	+0.9
1,040,800	-		Sama_0854	0.68	-0.6
1,040,808	-		Sama_0854	0.69	-1.4
1,040,860	+		Sama_0854	0.74	-2.0
1,040,860	+		Sama_0854	0.74	-2.8
1,040,861	-		Sama_0854	0.75	+0.4
1,040,885	+		Sama_0854	0.77	-2.2
1,040,885	+		Sama_0854	0.77	+0.3
1,040,885	+		Sama_0854	0.77	+1.0
1,040,885	+		Sama_0854	0.77	+0.4
1,040,885	+		Sama_0854	0.77	-0.1
1,040,886	-		Sama_0854	0.77	-1.9
1,040,886	-		Sama_0854	0.77	+0.7
1,040,886	-		Sama_0854	0.77	-1.5
1,040,886	-		Sama_0854	0.77	+0.7
1,040,896	+		Sama_0854	0.78	-2.0
1,040,896	+		Sama_0854	0.78	-1.0
1,040,896	+		Sama_0854	0.78	+0.3
1,040,897	-		Sama_0854	0.78	+0.5
1,040,899	+		Sama_0854	0.78	+1.2
1,040,908	+		Sama_0854	0.79	-0.8
1,040,908	+		Sama_0854	0.79	-2.1
1,040,909	-		Sama_0854	0.79	-0.3
1,041,114	+				-1.5
1,041,114	+				+1.3
1,041,114	+				-0.3
1,041,114	+				-1.4
1,041,115	-				+0.1
1,041,115	-				-1.3
1,041,115	-				-1.3
1,041,845	-				+0.3
1,041,845	-				+0.7
1,041,845	-				-3.0
1,041,846	+				+1.3
1,041,846	+				+2.4
1,041,847	-				+0.4
1,041,847	-				+0.9
1,041,887	+				-0.7
1,041,972	+				-1.5
1,041,972	+				-1.0
1,041,973	-				+1.0