Experiment: MoLS4 with L-Serine (N) without Molybdate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1152 and DVU1153 are separated by 128 nucleotides DVU1153 and DVU1154 are separated by 54 nucleotides DVU1154 and DVU1155 are separated by 66 nucleotides DVU1155 and DVU1156 are separated by 63 nucleotides DVU1156 and DVU1157 overlap by 4 nucleotides
DVU1152: DVU1152 - hypothetical protein (TIGR), at 1,246,091 to 1,246,705
DVU1152
DVU1153: DVU1153 - hypothetical protein (TIGR), at 1,246,834 to 1,246,944
DVU1153
DVU1154: DVU1154 - hypothetical protein (TIGR), at 1,246,999 to 1,247,136
DVU1154
DVU1155: DVU1155 - hypothetical protein (TIGR), at 1,247,203 to 1,247,307
DVU1155
DVU1156: DVU1156 - sigma-54 dependent transcriptional regulator, putative/response regulator (TIGR), at 1,247,371 to 1,248,810
DVU1156
DVU1157: DVU1157 - sensory box histidine kinase (TIGR), at 1,248,807 to 1,252,064
DVU1157
Position (kb) 1247
1248
1249 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 1246.373 kb on + strand, within DVU1152 at 1246.425 kb on - strand, within DVU1152 at 1246.473 kb on + strand, within DVU1152 at 1246.481 kb on - strand, within DVU1152 at 1246.527 kb on - strand, within DVU1152 at 1246.551 kb on + strand, within DVU1152 at 1246.607 kb on - strand, within DVU1152 at 1246.615 kb on + strand, within DVU1152 at 1246.620 kb on + strand, within DVU1152 at 1246.650 kb on + strand at 1246.769 kb on + strand at 1246.888 kb on + strand, within DVU1153 at 1246.943 kb on + strand at 1246.959 kb on + strand at 1246.959 kb on + strand at 1246.959 kb on + strand at 1247.015 kb on + strand, within DVU1154 at 1247.733 kb on - strand, within DVU1156 at 1247.863 kb on + strand, within DVU1156 at 1247.893 kb on - strand, within DVU1156 at 1247.900 kb on - strand, within DVU1156 at 1248.014 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.251 kb on + strand, within DVU1156 at 1248.276 kb on - strand, within DVU1156 at 1248.442 kb on + strand, within DVU1156 at 1248.488 kb on + strand, within DVU1156 at 1248.501 kb on - strand, within DVU1156 at 1248.503 kb on - strand, within DVU1156 at 1248.600 kb on + strand, within DVU1156 at 1248.608 kb on - strand, within DVU1156 at 1248.608 kb on - strand, within DVU1156 at 1248.806 kb on - strand at 1248.982 kb on + strand at 1249.275 kb on - strand, within DVU1157 at 1249.277 kb on + strand, within DVU1157 at 1249.310 kb on + strand, within DVU1157 at 1249.474 kb on - strand, within DVU1157 at 1249.611 kb on + strand, within DVU1157 at 1249.789 kb on + strand, within DVU1157 at 1249.791 kb on + strand, within DVU1157
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N) without Molybdate remove 1,246,373 + DVU1152 0.46 -0.2 1,246,425 - DVU1152 0.54 -0.2 1,246,473 + DVU1152 0.62 -2.5 1,246,481 - DVU1152 0.63 +0.1 1,246,527 - DVU1152 0.71 +1.1 1,246,551 + DVU1152 0.75 +0.1 1,246,607 - DVU1152 0.84 +0.3 1,246,615 + DVU1152 0.85 +0.9 1,246,620 + DVU1152 0.86 -0.1 1,246,650 + -0.1 1,246,769 + +0.4 1,246,888 + DVU1153 0.49 -0.2 1,246,943 + -0.3 1,246,959 + +0.3 1,246,959 + +1.0 1,246,959 + +0.4 1,247,015 + DVU1154 0.12 -0.3 1,247,733 - DVU1156 0.25 +0.8 1,247,863 + DVU1156 0.34 +1.1 1,247,893 - DVU1156 0.36 -0.1 1,247,900 - DVU1156 0.37 -0.2 1,248,014 + DVU1156 0.45 +0.9 1,248,125 + DVU1156 0.52 -0.1 1,248,125 + DVU1156 0.52 -0.4 1,248,125 + DVU1156 0.52 -0.6 1,248,125 + DVU1156 0.52 +0.4 1,248,125 + DVU1156 0.52 -0.1 1,248,125 + DVU1156 0.52 +0.2 1,248,133 - DVU1156 0.53 +0.8 1,248,133 - DVU1156 0.53 +1.0 1,248,133 - DVU1156 0.53 +0.1 1,248,133 - DVU1156 0.53 -0.1 1,248,133 - DVU1156 0.53 -0.0 1,248,133 - DVU1156 0.53 +0.9 1,248,251 + DVU1156 0.61 -0.4 1,248,276 - DVU1156 0.63 +1.4 1,248,442 + DVU1156 0.74 +0.5 1,248,488 + DVU1156 0.78 +0.1 1,248,501 - DVU1156 0.78 +0.6 1,248,503 - DVU1156 0.79 +0.3 1,248,600 + DVU1156 0.85 -0.4 1,248,608 - DVU1156 0.86 -0.4 1,248,608 - DVU1156 0.86 +0.2 1,248,806 - +0.6 1,248,982 + -0.1 1,249,275 - DVU1157 0.14 -0.9 1,249,277 + DVU1157 0.14 +4.2 1,249,310 + DVU1157 0.15 +0.1 1,249,474 - DVU1157 0.20 -0.9 1,249,611 + DVU1157 0.25 -1.2 1,249,789 + DVU1157 0.30 +0.1 1,249,791 + DVU1157 0.30 -0.7
Or see this region's nucleotide sequence