Experiment: MoLS4 with L-Serine (N) without Molybdate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0619 and DVU0620 are separated by 115 nucleotides DVU0620 and DVU0621 are separated by 286 nucleotides
DVU0619: DVU0619 - sigma-54 dependent transcriptional regulator (TIGR), at 684,470 to 685,909
DVU0619
DVU0620: DVU0620 - endoribonuclease, L-PSP family (TIGR), at 686,025 to 686,408
DVU0620
DVU0621: DVU0621 - sigma-54 dependent DNA-binding response regulator (TIGR), at 686,695 to 688,092
DVU0621
Position (kb) 686
687 Strain fitness (log2 ratio) -2
-1
0
1 at 685.054 kb on + strand, within DVU0619 at 685.110 kb on + strand, within DVU0619 at 685.238 kb on - strand, within DVU0619 at 685.286 kb on + strand, within DVU0619 at 685.286 kb on - strand, within DVU0619 at 685.386 kb on + strand, within DVU0619 at 685.389 kb on - strand, within DVU0619 at 685.394 kb on - strand, within DVU0619 at 685.443 kb on - strand, within DVU0619 at 685.492 kb on - strand, within DVU0619 at 685.499 kb on + strand, within DVU0619 at 685.539 kb on - strand, within DVU0619 at 685.554 kb on - strand, within DVU0619 at 685.554 kb on - strand, within DVU0619 at 685.589 kb on + strand, within DVU0619 at 685.615 kb on + strand, within DVU0619 at 685.660 kb on - strand, within DVU0619 at 685.682 kb on - strand, within DVU0619 at 685.687 kb on + strand, within DVU0619 at 685.687 kb on + strand, within DVU0619 at 685.695 kb on - strand, within DVU0619 at 685.695 kb on - strand, within DVU0619 at 685.695 kb on - strand, within DVU0619 at 685.702 kb on - strand, within DVU0619 at 685.737 kb on + strand, within DVU0619 at 685.747 kb on + strand, within DVU0619 at 685.861 kb on - strand at 685.888 kb on - strand at 685.924 kb on - strand at 685.924 kb on - strand at 686.011 kb on - strand at 686.033 kb on + strand at 686.083 kb on - strand, within DVU0620 at 686.245 kb on - strand, within DVU0620 at 686.258 kb on + strand, within DVU0620 at 686.379 kb on - strand at 686.401 kb on + strand at 686.409 kb on + strand at 686.547 kb on + strand at 686.565 kb on - strand at 686.610 kb on - strand at 686.633 kb on + strand at 686.853 kb on + strand, within DVU0621 at 686.861 kb on - strand, within DVU0621 at 686.863 kb on - strand, within DVU0621 at 686.964 kb on + strand, within DVU0621 at 687.106 kb on + strand, within DVU0621 at 687.119 kb on - strand, within DVU0621 at 687.158 kb on + strand, within DVU0621 at 687.191 kb on - strand, within DVU0621 at 687.191 kb on - strand, within DVU0621 at 687.204 kb on + strand, within DVU0621 at 687.208 kb on + strand, within DVU0621 at 687.229 kb on - strand, within DVU0621 at 687.339 kb on - strand, within DVU0621 at 687.350 kb on + strand, within DVU0621 at 687.394 kb on + strand, within DVU0621
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N) without Molybdate remove 685,054 + DVU0619 0.41 +0.4 685,110 + DVU0619 0.44 -0.1 685,238 - DVU0619 0.53 +0.1 685,286 + DVU0619 0.57 -0.4 685,286 - DVU0619 0.57 +0.8 685,386 + DVU0619 0.64 -0.3 685,389 - DVU0619 0.64 -0.1 685,394 - DVU0619 0.64 -0.1 685,443 - DVU0619 0.68 +0.4 685,492 - DVU0619 0.71 -0.3 685,499 + DVU0619 0.71 -0.2 685,539 - DVU0619 0.74 -0.2 685,554 - DVU0619 0.75 -0.1 685,554 - DVU0619 0.75 +0.0 685,589 + DVU0619 0.78 +0.8 685,615 + DVU0619 0.80 +0.6 685,660 - DVU0619 0.83 -0.4 685,682 - DVU0619 0.84 -2.0 685,687 + DVU0619 0.85 -0.0 685,687 + DVU0619 0.85 -2.2 685,695 - DVU0619 0.85 +0.0 685,695 - DVU0619 0.85 -0.4 685,695 - DVU0619 0.85 -0.5 685,702 - DVU0619 0.86 -0.3 685,737 + DVU0619 0.88 +1.3 685,747 + DVU0619 0.89 -0.1 685,861 - -0.1 685,888 - -0.5 685,924 - -0.2 685,924 - +0.3 686,011 - -0.9 686,033 + +0.5 686,083 - DVU0620 0.15 -0.1 686,245 - DVU0620 0.57 -1.4 686,258 + DVU0620 0.61 +0.6 686,379 - -0.5 686,401 + -0.2 686,409 + -0.5 686,547 + -0.6 686,565 - +0.9 686,610 - +0.9 686,633 + +0.0 686,853 + DVU0621 0.11 -0.2 686,861 - DVU0621 0.12 +0.5 686,863 - DVU0621 0.12 +0.7 686,964 + DVU0621 0.19 +0.1 687,106 + DVU0621 0.29 -0.3 687,119 - DVU0621 0.30 +0.9 687,158 + DVU0621 0.33 -1.0 687,191 - DVU0621 0.35 +0.0 687,191 - DVU0621 0.35 +0.1 687,204 + DVU0621 0.36 -0.5 687,208 + DVU0621 0.37 -0.5 687,229 - DVU0621 0.38 -0.2 687,339 - DVU0621 0.46 -0.2 687,350 + DVU0621 0.47 -0.5 687,394 + DVU0621 0.50 +1.5
Or see this region's nucleotide sequence