Experiment: MoLS4 with L-Serine (N) without Molybdate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2713 and DVU2714 overlap by 4 nucleotides DVU2714 and DVU2715 are separated by 2 nucleotides DVU2715 and DVU2716 overlap by 14 nucleotides
DVU2713: DVU2713 - conserved hypothetical protein (TIGR), at 2,819,290 to 2,819,721
DVU2713
DVU2714: DVU2714 - conserved hypothetical protein (TIGR), at 2,819,718 to 2,820,347
DVU2714
DVU2715: DVU2715 - conserved hypothetical protein (TIGR), at 2,820,350 to 2,820,535
DVU2715
DVU2716: DVU2716 - tail sheath protein, putative (TIGR), at 2,820,522 to 2,821,943
DVU2716
Position (kb)
2820
2821 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2819.388 kb on - strand, within DVU2713 at 2819.411 kb on + strand, within DVU2713 at 2819.493 kb on + strand, within DVU2713 at 2819.493 kb on + strand, within DVU2713 at 2819.493 kb on + strand, within DVU2713 at 2819.493 kb on + strand, within DVU2713 at 2819.496 kb on - strand, within DVU2713 at 2819.501 kb on - strand, within DVU2713 at 2819.501 kb on - strand, within DVU2713 at 2819.503 kb on + strand, within DVU2713 at 2819.503 kb on + strand, within DVU2713 at 2819.550 kb on - strand, within DVU2713 at 2819.579 kb on - strand, within DVU2713 at 2819.630 kb on + strand, within DVU2713 at 2819.639 kb on + strand, within DVU2713 at 2819.639 kb on + strand, within DVU2713 at 2819.639 kb on + strand, within DVU2713 at 2819.647 kb on - strand, within DVU2713 at 2819.647 kb on - strand, within DVU2713 at 2819.649 kb on + strand, within DVU2713 at 2819.685 kb on - strand at 2819.723 kb on + strand at 2819.741 kb on + strand at 2819.827 kb on + strand, within DVU2714 at 2819.887 kb on - strand, within DVU2714 at 2820.034 kb on - strand, within DVU2714 at 2820.062 kb on - strand, within DVU2714 at 2820.117 kb on - strand, within DVU2714 at 2820.117 kb on - strand, within DVU2714 at 2820.164 kb on + strand, within DVU2714 at 2820.183 kb on + strand, within DVU2714 at 2820.325 kb on - strand at 2820.380 kb on - strand, within DVU2715 at 2820.436 kb on + strand, within DVU2715 at 2820.453 kb on - strand, within DVU2715 at 2820.453 kb on - strand, within DVU2715 at 2820.473 kb on + strand, within DVU2715 at 2820.552 kb on + strand at 2820.665 kb on - strand, within DVU2716 at 2820.675 kb on - strand, within DVU2716 at 2820.689 kb on - strand, within DVU2716 at 2820.701 kb on - strand, within DVU2716 at 2820.703 kb on + strand, within DVU2716 at 2820.717 kb on - strand, within DVU2716 at 2820.732 kb on + strand, within DVU2716 at 2820.745 kb on - strand, within DVU2716 at 2820.753 kb on + strand, within DVU2716 at 2820.761 kb on - strand, within DVU2716 at 2820.801 kb on - strand, within DVU2716 at 2820.865 kb on + strand, within DVU2716 at 2820.912 kb on - strand, within DVU2716 at 2820.914 kb on - strand, within DVU2716 at 2820.940 kb on - strand, within DVU2716 at 2821.088 kb on - strand, within DVU2716 at 2821.090 kb on - strand, within DVU2716 at 2821.097 kb on + strand, within DVU2716 at 2821.097 kb on + strand, within DVU2716 at 2821.097 kb on + strand, within DVU2716 at 2821.097 kb on + strand, within DVU2716 at 2821.105 kb on + strand, within DVU2716 at 2821.232 kb on - strand, within DVU2716 at 2821.262 kb on + strand, within DVU2716 at 2821.272 kb on - strand, within DVU2716 at 2821.272 kb on - strand, within DVU2716 at 2821.272 kb on - strand, within DVU2716 at 2821.287 kb on + strand, within DVU2716 at 2821.287 kb on + strand, within DVU2716 at 2821.287 kb on + strand, within DVU2716 at 2821.329 kb on - strand, within DVU2716 at 2821.329 kb on - strand, within DVU2716 at 2821.340 kb on + strand, within DVU2716 at 2821.358 kb on - strand, within DVU2716 at 2821.435 kb on + strand, within DVU2716 at 2821.477 kb on + strand, within DVU2716
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N) without Molybdate remove 2,819,388 - DVU2713 0.23 -1.6 2,819,411 + DVU2713 0.28 +0.1 2,819,493 + DVU2713 0.47 +0.0 2,819,493 + DVU2713 0.47 -0.3 2,819,493 + DVU2713 0.47 -1.8 2,819,493 + DVU2713 0.47 +0.4 2,819,496 - DVU2713 0.48 -0.2 2,819,501 - DVU2713 0.49 +0.4 2,819,501 - DVU2713 0.49 -0.3 2,819,503 + DVU2713 0.49 +0.1 2,819,503 + DVU2713 0.49 -0.9 2,819,550 - DVU2713 0.60 +0.4 2,819,579 - DVU2713 0.67 +0.3 2,819,630 + DVU2713 0.79 -0.9 2,819,639 + DVU2713 0.81 -1.4 2,819,639 + DVU2713 0.81 +0.7 2,819,639 + DVU2713 0.81 +1.0 2,819,647 - DVU2713 0.83 -1.0 2,819,647 - DVU2713 0.83 -0.1 2,819,649 + DVU2713 0.83 -0.1 2,819,685 - -0.0 2,819,723 + +0.2 2,819,741 + -0.5 2,819,827 + DVU2714 0.17 -0.2 2,819,887 - DVU2714 0.27 +0.1 2,820,034 - DVU2714 0.50 -0.1 2,820,062 - DVU2714 0.55 -0.6 2,820,117 - DVU2714 0.63 +0.5 2,820,117 - DVU2714 0.63 +0.1 2,820,164 + DVU2714 0.71 -0.3 2,820,183 + DVU2714 0.74 -0.2 2,820,325 - +0.6 2,820,380 - DVU2715 0.16 +0.9 2,820,436 + DVU2715 0.46 +0.8 2,820,453 - DVU2715 0.55 +0.4 2,820,453 - DVU2715 0.55 -0.0 2,820,473 + DVU2715 0.66 +0.2 2,820,552 + +0.8 2,820,665 - DVU2716 0.10 -0.8 2,820,675 - DVU2716 0.11 +0.1 2,820,689 - DVU2716 0.12 -0.9 2,820,701 - DVU2716 0.13 -0.0 2,820,703 + DVU2716 0.13 -0.4 2,820,717 - DVU2716 0.14 -0.2 2,820,732 + DVU2716 0.15 +0.2 2,820,745 - DVU2716 0.16 -0.1 2,820,753 + DVU2716 0.16 -0.2 2,820,761 - DVU2716 0.17 +0.3 2,820,801 - DVU2716 0.20 -0.1 2,820,865 + DVU2716 0.24 -0.1 2,820,912 - DVU2716 0.27 -0.3 2,820,914 - DVU2716 0.28 +0.2 2,820,940 - DVU2716 0.29 -0.4 2,821,088 - DVU2716 0.40 -1.5 2,821,090 - DVU2716 0.40 +0.3 2,821,097 + DVU2716 0.40 -0.2 2,821,097 + DVU2716 0.40 +0.9 2,821,097 + DVU2716 0.40 +0.2 2,821,097 + DVU2716 0.40 +0.4 2,821,105 + DVU2716 0.41 -0.2 2,821,232 - DVU2716 0.50 -0.2 2,821,262 + DVU2716 0.52 -0.1 2,821,272 - DVU2716 0.53 -2.2 2,821,272 - DVU2716 0.53 -0.6 2,821,272 - DVU2716 0.53 +0.6 2,821,287 + DVU2716 0.54 -0.7 2,821,287 + DVU2716 0.54 -0.3 2,821,287 + DVU2716 0.54 -0.3 2,821,329 - DVU2716 0.57 +1.5 2,821,329 - DVU2716 0.57 -1.1 2,821,340 + DVU2716 0.58 +0.4 2,821,358 - DVU2716 0.59 +2.1 2,821,435 + DVU2716 0.64 +0.1 2,821,477 + DVU2716 0.67 -0.0
Or see this region's nucleotide sequence