Experiment: MoLS4 with L-Serine (N) without Molybdate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2662 and DVU2663 are separated by 24 nucleotides DVU2663 and pstB-2 are separated by 2 nucleotides pstB-2 and DVU2665 are separated by 31 nucleotides DVU2665 and DVU2666 are separated by 35 nucleotides
DVU2662: DVU2662 - conserved hypothetical protein (TIGR), at 2,774,135 to 2,774,899
DVU2662
DVU2663: DVU2663 - conserved hypothetical protein (TIGR), at 2,774,924 to 2,775,400
DVU2663
DVU2664: pstB-2 - phosphate ABC transporter, ATP-binding protein (TIGR), at 2,775,403 to 2,776,269
pstB-2
DVU2665: DVU2665 - phosphate ABC transporter, permease protein, putative (TIGR), at 2,776,301 to 2,777,185
DVU2665
DVU2666: DVU2666 - phosphate ABC transporter, permease protein, putative (TIGR), at 2,777,221 to 2,778,096
DVU2666
Position (kb)
2775
2776
2777 Strain fitness (log2 ratio)
-1
0
1
2 at 2774.419 kb on + strand, within DVU2662 at 2774.450 kb on + strand, within DVU2662 at 2774.735 kb on - strand, within DVU2662 at 2774.759 kb on - strand, within DVU2662 at 2774.796 kb on + strand, within DVU2662 at 2774.804 kb on - strand, within DVU2662 at 2774.824 kb on + strand at 2774.831 kb on - strand at 2774.927 kb on + strand at 2775.025 kb on + strand, within DVU2663 at 2775.033 kb on + strand, within DVU2663 at 2775.033 kb on + strand, within DVU2663 at 2775.041 kb on - strand, within DVU2663 at 2775.051 kb on + strand, within DVU2663 at 2775.069 kb on - strand, within DVU2663 at 2775.084 kb on - strand, within DVU2663 at 2775.118 kb on + strand, within DVU2663 at 2775.118 kb on + strand, within DVU2663 at 2775.153 kb on + strand, within DVU2663 at 2775.153 kb on + strand, within DVU2663 at 2775.153 kb on + strand, within DVU2663 at 2775.158 kb on + strand, within DVU2663 at 2775.161 kb on - strand, within DVU2663 at 2775.166 kb on - strand, within DVU2663 at 2775.176 kb on - strand, within DVU2663 at 2775.341 kb on + strand, within DVU2663 at 2775.354 kb on + strand at 2775.361 kb on + strand at 2775.362 kb on - strand at 2775.406 kb on + strand at 2775.444 kb on + strand at 2775.452 kb on - strand at 2775.468 kb on - strand at 2775.476 kb on - strand at 2775.495 kb on + strand, within pstB-2 at 2775.505 kb on + strand, within pstB-2 at 2775.546 kb on + strand, within pstB-2 at 2775.554 kb on + strand, within pstB-2 at 2775.602 kb on + strand, within pstB-2 at 2775.627 kb on - strand, within pstB-2 at 2775.684 kb on - strand, within pstB-2 at 2775.703 kb on - strand, within pstB-2 at 2775.705 kb on + strand, within pstB-2 at 2775.705 kb on + strand, within pstB-2 at 2775.705 kb on + strand, within pstB-2 at 2775.705 kb on + strand, within pstB-2 at 2775.713 kb on - strand, within pstB-2 at 2775.713 kb on - strand, within pstB-2 at 2775.713 kb on - strand, within pstB-2 at 2775.730 kb on + strand, within pstB-2 at 2775.730 kb on + strand, within pstB-2 at 2775.738 kb on + strand, within pstB-2 at 2775.823 kb on + strand, within pstB-2 at 2775.826 kb on - strand, within pstB-2 at 2775.833 kb on - strand, within pstB-2 at 2775.900 kb on + strand, within pstB-2 at 2775.908 kb on - strand, within pstB-2 at 2775.926 kb on + strand, within pstB-2 at 2776.009 kb on + strand, within pstB-2 at 2776.021 kb on + strand, within pstB-2 at 2776.107 kb on - strand, within pstB-2 at 2776.176 kb on + strand, within pstB-2 at 2776.185 kb on + strand at 2776.264 kb on - strand at 2776.283 kb on - strand at 2776.292 kb on + strand at 2776.320 kb on - strand at 2776.339 kb on - strand at 2776.413 kb on + strand, within DVU2665 at 2776.473 kb on + strand, within DVU2665 at 2776.507 kb on - strand, within DVU2665 at 2776.507 kb on - strand, within DVU2665 at 2776.582 kb on + strand, within DVU2665 at 2776.588 kb on - strand, within DVU2665 at 2776.588 kb on - strand, within DVU2665 at 2776.588 kb on - strand, within DVU2665 at 2776.698 kb on + strand, within DVU2665 at 2776.803 kb on - strand, within DVU2665 at 2776.832 kb on + strand, within DVU2665 at 2776.866 kb on - strand, within DVU2665 at 2776.929 kb on + strand, within DVU2665 at 2776.937 kb on - strand, within DVU2665 at 2776.992 kb on + strand, within DVU2665 at 2777.000 kb on - strand, within DVU2665 at 2777.010 kb on - strand, within DVU2665 at 2777.018 kb on - strand, within DVU2665 at 2777.019 kb on + strand, within DVU2665 at 2777.087 kb on + strand, within DVU2665 at 2777.123 kb on + strand at 2777.169 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N) without Molybdate remove 2,774,419 + DVU2662 0.37 -0.1 2,774,450 + DVU2662 0.41 +0.7 2,774,735 - DVU2662 0.78 +0.6 2,774,759 - DVU2662 0.82 -0.2 2,774,796 + DVU2662 0.86 -0.4 2,774,804 - DVU2662 0.87 +0.5 2,774,824 + +0.1 2,774,831 - +2.0 2,774,927 + +0.2 2,775,025 + DVU2663 0.21 +0.0 2,775,033 + DVU2663 0.23 -0.1 2,775,033 + DVU2663 0.23 +0.9 2,775,041 - DVU2663 0.25 +0.2 2,775,051 + DVU2663 0.27 -0.3 2,775,069 - DVU2663 0.30 -0.9 2,775,084 - DVU2663 0.34 -0.1 2,775,118 + DVU2663 0.41 +0.2 2,775,118 + DVU2663 0.41 -0.5 2,775,153 + DVU2663 0.48 -0.4 2,775,153 + DVU2663 0.48 +0.9 2,775,153 + DVU2663 0.48 +1.1 2,775,158 + DVU2663 0.49 -0.1 2,775,161 - DVU2663 0.50 -0.4 2,775,166 - DVU2663 0.51 -0.2 2,775,176 - DVU2663 0.53 -0.4 2,775,341 + DVU2663 0.87 -0.2 2,775,354 + +1.5 2,775,361 + -0.8 2,775,362 - -0.1 2,775,406 + +0.5 2,775,444 + -1.5 2,775,452 - +0.0 2,775,468 - -0.2 2,775,476 - -0.2 2,775,495 + pstB-2 DVU2664 0.11 +0.1 2,775,505 + pstB-2 DVU2664 0.12 -0.4 2,775,546 + pstB-2 DVU2664 0.16 -0.0 2,775,554 + pstB-2 DVU2664 0.17 +0.1 2,775,602 + pstB-2 DVU2664 0.23 +0.3 2,775,627 - pstB-2 DVU2664 0.26 -0.0 2,775,684 - pstB-2 DVU2664 0.32 -1.3 2,775,703 - pstB-2 DVU2664 0.35 -0.1 2,775,705 + pstB-2 DVU2664 0.35 -0.0 2,775,705 + pstB-2 DVU2664 0.35 -0.3 2,775,705 + pstB-2 DVU2664 0.35 +0.2 2,775,705 + pstB-2 DVU2664 0.35 -0.5 2,775,713 - pstB-2 DVU2664 0.36 -0.2 2,775,713 - pstB-2 DVU2664 0.36 -0.3 2,775,713 - pstB-2 DVU2664 0.36 -0.3 2,775,730 + pstB-2 DVU2664 0.38 -0.2 2,775,730 + pstB-2 DVU2664 0.38 +0.1 2,775,738 + pstB-2 DVU2664 0.39 -0.7 2,775,823 + pstB-2 DVU2664 0.48 +0.9 2,775,826 - pstB-2 DVU2664 0.49 -0.2 2,775,833 - pstB-2 DVU2664 0.50 -0.1 2,775,900 + pstB-2 DVU2664 0.57 +1.5 2,775,908 - pstB-2 DVU2664 0.58 +0.1 2,775,926 + pstB-2 DVU2664 0.60 -0.3 2,776,009 + pstB-2 DVU2664 0.70 -0.3 2,776,021 + pstB-2 DVU2664 0.71 -0.8 2,776,107 - pstB-2 DVU2664 0.81 +0.1 2,776,176 + pstB-2 DVU2664 0.89 -0.3 2,776,185 + -0.6 2,776,264 - +0.3 2,776,283 - -0.0 2,776,292 + -0.7 2,776,320 - -0.1 2,776,339 - -0.0 2,776,413 + DVU2665 0.13 +0.0 2,776,473 + DVU2665 0.19 -0.7 2,776,507 - DVU2665 0.23 -0.0 2,776,507 - DVU2665 0.23 -0.1 2,776,582 + DVU2665 0.32 -0.2 2,776,588 - DVU2665 0.32 -0.7 2,776,588 - DVU2665 0.32 -0.2 2,776,588 - DVU2665 0.32 -0.2 2,776,698 + DVU2665 0.45 -0.0 2,776,803 - DVU2665 0.57 -0.3 2,776,832 + DVU2665 0.60 -0.4 2,776,866 - DVU2665 0.64 -0.4 2,776,929 + DVU2665 0.71 -0.1 2,776,937 - DVU2665 0.72 -0.4 2,776,992 + DVU2665 0.78 -0.2 2,777,000 - DVU2665 0.79 -0.1 2,777,010 - DVU2665 0.80 +0.5 2,777,018 - DVU2665 0.81 -0.1 2,777,019 + DVU2665 0.81 -0.4 2,777,087 + DVU2665 0.89 +0.6 2,777,123 + +1.1 2,777,169 + -0.1
Or see this region's nucleotide sequence