Experiment: MoLS4 with L-Serine (N) without Molybdate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2220 and DVU2221 are separated by 45 nucleotides DVU2221 and ssb are separated by 4 nucleotides ssb and DVU2223 are separated by 39 nucleotides DVU2223 and DVU2224 are separated by 2 nucleotides DVU2224 and DVU2225 are separated by 18 nucleotides
DVU2220: DVU2220 - conserved hypothetical protein (TIGR), at 2,314,522 to 2,314,791
DVU2220
DVU2221: DVU2221 - hypothetical protein (TIGR), at 2,314,837 to 2,314,977
DVU2221
DVU2222: ssb - single-strand binding protein (TIGR), at 2,314,982 to 2,315,512
ssb
DVU2223: DVU2223 - hypothetical protein (TIGR), at 2,315,552 to 2,315,896
DVU2223
DVU2224: DVU2224 - hypothetical protein (TIGR), at 2,315,899 to 2,316,549
DVU2224
DVU2225: DVU2225 - acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit (TIGR), at 2,316,568 to 2,318,823
DVU2225
Position (kb)
2315
2316 Strain fitness (log2 ratio)
-1
0
1 at 2314.650 kb on - strand, within DVU2220 at 2314.906 kb on - strand, within DVU2221 at 2314.980 kb on + strand at 2315.638 kb on + strand, within DVU2223 at 2315.720 kb on - strand, within DVU2223 at 2315.824 kb on - strand, within DVU2223 at 2315.879 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N) without Molybdate remove 2,314,650 - DVU2220 0.47 -0.4 2,314,906 - DVU2221 0.49 -0.4 2,314,980 + -0.1 2,315,638 + DVU2223 0.25 -1.0 2,315,720 - DVU2223 0.49 -0.4 2,315,824 - DVU2223 0.79 -0.3 2,315,879 - -0.3
Or see this region's nucleotide sequence