Experiment: MoLS4 with L-Serine (N) without Molybdate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2041 and DVU2042 are separated by 61 nucleotides DVU2042 and DVU2043 are separated by 68 nucleotides
DVU2041: DVU2041 - conserved hypothetical protein (TIGR), at 2,118,990 to 2,119,985
DVU2041
DVU2042: DVU2042 - Fic family protein (TIGR), at 2,120,047 to 2,120,793
DVU2042
DVU2043: DVU2043 - conserved hypothetical protein (TIGR), at 2,120,862 to 2,122,463
DVU2043
Position (kb)
2120
2121 Strain fitness (log2 ratio)
-1
0
1 at 2119.127 kb on + strand, within DVU2041 at 2119.180 kb on + strand, within DVU2041 at 2119.194 kb on - strand, within DVU2041 at 2119.264 kb on + strand, within DVU2041 at 2119.267 kb on - strand, within DVU2041 at 2119.271 kb on + strand, within DVU2041 at 2119.272 kb on - strand, within DVU2041 at 2119.272 kb on - strand, within DVU2041 at 2119.338 kb on + strand, within DVU2041 at 2119.474 kb on + strand, within DVU2041 at 2119.474 kb on + strand, within DVU2041 at 2119.474 kb on - strand, within DVU2041 at 2119.488 kb on - strand, within DVU2041 at 2119.492 kb on + strand, within DVU2041 at 2119.521 kb on - strand, within DVU2041 at 2119.530 kb on - strand, within DVU2041 at 2119.543 kb on - strand, within DVU2041 at 2119.623 kb on + strand, within DVU2041 at 2119.638 kb on + strand, within DVU2041 at 2119.682 kb on + strand, within DVU2041 at 2119.723 kb on - strand, within DVU2041 at 2119.756 kb on - strand, within DVU2041 at 2119.863 kb on + strand, within DVU2041 at 2119.901 kb on - strand at 2119.933 kb on + strand at 2119.940 kb on - strand at 2119.948 kb on - strand at 2120.085 kb on + strand at 2120.361 kb on - strand, within DVU2042 at 2120.398 kb on - strand, within DVU2042 at 2120.402 kb on + strand, within DVU2042 at 2120.497 kb on + strand, within DVU2042 at 2120.634 kb on + strand, within DVU2042 at 2120.640 kb on - strand, within DVU2042 at 2120.685 kb on + strand, within DVU2042 at 2120.693 kb on - strand, within DVU2042 at 2120.778 kb on + strand at 2120.827 kb on - strand at 2120.867 kb on - strand at 2120.937 kb on - strand at 2120.960 kb on - strand at 2121.025 kb on - strand, within DVU2043 at 2121.073 kb on + strand, within DVU2043 at 2121.097 kb on + strand, within DVU2043 at 2121.105 kb on - strand, within DVU2043 at 2121.105 kb on - strand, within DVU2043 at 2121.189 kb on + strand, within DVU2043 at 2121.205 kb on + strand, within DVU2043 at 2121.247 kb on - strand, within DVU2043 at 2121.481 kb on + strand, within DVU2043 at 2121.482 kb on + strand, within DVU2043 at 2121.490 kb on - strand, within DVU2043 at 2121.571 kb on + strand, within DVU2043 at 2121.571 kb on + strand, within DVU2043 at 2121.641 kb on + strand, within DVU2043 at 2121.641 kb on + strand, within DVU2043 at 2121.651 kb on - strand, within DVU2043 at 2121.742 kb on - strand, within DVU2043
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N) without Molybdate remove 2,119,127 + DVU2041 0.14 -0.3 2,119,180 + DVU2041 0.19 -1.3 2,119,194 - DVU2041 0.20 +0.5 2,119,264 + DVU2041 0.28 -0.3 2,119,267 - DVU2041 0.28 +1.0 2,119,271 + DVU2041 0.28 +0.7 2,119,272 - DVU2041 0.28 -0.3 2,119,272 - DVU2041 0.28 -0.1 2,119,338 + DVU2041 0.35 +1.0 2,119,474 + DVU2041 0.49 -0.0 2,119,474 + DVU2041 0.49 -0.8 2,119,474 - DVU2041 0.49 -0.8 2,119,488 - DVU2041 0.50 -0.1 2,119,492 + DVU2041 0.50 -0.2 2,119,521 - DVU2041 0.53 -0.5 2,119,530 - DVU2041 0.54 +1.0 2,119,543 - DVU2041 0.56 -0.4 2,119,623 + DVU2041 0.64 +0.3 2,119,638 + DVU2041 0.65 -0.3 2,119,682 + DVU2041 0.69 -0.4 2,119,723 - DVU2041 0.74 +0.1 2,119,756 - DVU2041 0.77 -0.2 2,119,863 + DVU2041 0.88 -0.9 2,119,901 - -0.2 2,119,933 + +0.2 2,119,940 - -0.2 2,119,948 - -0.6 2,120,085 + -0.3 2,120,361 - DVU2042 0.42 +0.2 2,120,398 - DVU2042 0.47 -0.1 2,120,402 + DVU2042 0.48 -0.2 2,120,497 + DVU2042 0.60 +0.1 2,120,634 + DVU2042 0.79 -0.0 2,120,640 - DVU2042 0.79 -0.4 2,120,685 + DVU2042 0.85 -0.2 2,120,693 - DVU2042 0.86 +1.0 2,120,778 + -0.2 2,120,827 - +0.1 2,120,867 - -0.8 2,120,937 - +0.1 2,120,960 - -0.5 2,121,025 - DVU2043 0.10 -0.1 2,121,073 + DVU2043 0.13 +1.2 2,121,097 + DVU2043 0.15 +1.1 2,121,105 - DVU2043 0.15 +0.1 2,121,105 - DVU2043 0.15 -0.5 2,121,189 + DVU2043 0.20 +0.4 2,121,205 + DVU2043 0.21 -0.3 2,121,247 - DVU2043 0.24 -0.3 2,121,481 + DVU2043 0.39 -0.5 2,121,482 + DVU2043 0.39 -0.1 2,121,490 - DVU2043 0.39 -0.4 2,121,571 + DVU2043 0.44 +0.1 2,121,571 + DVU2043 0.44 +0.2 2,121,641 + DVU2043 0.49 +0.0 2,121,641 + DVU2043 0.49 -0.1 2,121,651 - DVU2043 0.49 +0.8 2,121,742 - DVU2043 0.55 +0.2
Or see this region's nucleotide sequence