Experiment: MoLS4 with L-Serine (N) without Molybdate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0740 and DVU0741 are separated by 56 nucleotides DVU0741 and DVU0742 are separated by 7 nucleotides DVU0742 and DVU0743 are separated by 4 nucleotides
DVU0740: DVU0740 - membrane protein, putative (TIGR), at 827,914 to 829,089
DVU0740
DVU0741: DVU0741 - hypothetical protein (TIGR), at 829,146 to 829,622
DVU0741
DVU0742: DVU0742 - hypothetical protein (TIGR), at 829,630 to 830,466
DVU0742
DVU0743: DVU0743 - sensory box histidine kinase (TIGR), at 830,471 to 832,468
DVU0743
Position (kb) 829
830
831 Strain fitness (log2 ratio) -2
-1
0
1
2 at 828.691 kb on - strand, within DVU0740 at 828.704 kb on - strand, within DVU0740 at 828.796 kb on - strand, within DVU0740 at 828.933 kb on + strand, within DVU0740 at 828.945 kb on + strand, within DVU0740 at 828.969 kb on + strand, within DVU0740 at 829.059 kb on + strand at 829.073 kb on - strand at 829.150 kb on - strand at 829.154 kb on + strand at 829.164 kb on + strand at 829.170 kb on - strand at 829.172 kb on - strand at 829.177 kb on + strand at 829.243 kb on - strand, within DVU0741 at 829.286 kb on + strand, within DVU0741 at 829.289 kb on - strand, within DVU0741 at 829.368 kb on - strand, within DVU0741 at 829.389 kb on - strand, within DVU0741 at 829.422 kb on + strand, within DVU0741 at 829.512 kb on - strand, within DVU0741 at 829.527 kb on + strand, within DVU0741 at 829.636 kb on - strand at 829.710 kb on + strand at 829.737 kb on + strand, within DVU0742 at 829.747 kb on + strand, within DVU0742 at 829.755 kb on - strand, within DVU0742 at 829.755 kb on - strand, within DVU0742 at 829.819 kb on + strand, within DVU0742 at 829.897 kb on - strand, within DVU0742 at 829.907 kb on - strand, within DVU0742 at 829.911 kb on + strand, within DVU0742 at 829.951 kb on + strand, within DVU0742 at 829.992 kb on + strand, within DVU0742 at 830.000 kb on - strand, within DVU0742 at 830.000 kb on - strand, within DVU0742 at 830.001 kb on - strand, within DVU0742 at 830.040 kb on - strand, within DVU0742 at 830.086 kb on + strand, within DVU0742 at 830.149 kb on - strand, within DVU0742 at 830.226 kb on + strand, within DVU0742 at 830.252 kb on - strand, within DVU0742 at 830.252 kb on - strand, within DVU0742 at 830.290 kb on + strand, within DVU0742 at 830.298 kb on - strand, within DVU0742 at 830.300 kb on + strand, within DVU0742 at 830.344 kb on - strand, within DVU0742 at 830.363 kb on + strand, within DVU0742 at 830.405 kb on - strand at 830.565 kb on + strand at 830.572 kb on - strand at 830.591 kb on - strand at 830.715 kb on + strand, within DVU0743 at 830.725 kb on + strand, within DVU0743 at 830.725 kb on + strand, within DVU0743 at 830.839 kb on - strand, within DVU0743 at 830.854 kb on - strand, within DVU0743 at 830.929 kb on + strand, within DVU0743 at 830.958 kb on - strand, within DVU0743 at 830.958 kb on - strand, within DVU0743 at 831.050 kb on + strand, within DVU0743 at 831.069 kb on - strand, within DVU0743 at 831.077 kb on - strand, within DVU0743 at 831.227 kb on - strand, within DVU0743 at 831.249 kb on + strand, within DVU0743 at 831.282 kb on + strand, within DVU0743 at 831.442 kb on + strand, within DVU0743 at 831.457 kb on + strand, within DVU0743
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N) without Molybdate remove 828,691 - DVU0740 0.66 -0.1 828,704 - DVU0740 0.67 +1.4 828,796 - DVU0740 0.75 -1.1 828,933 + DVU0740 0.87 +2.6 828,945 + DVU0740 0.88 +0.1 828,969 + DVU0740 0.90 +1.8 829,059 + -0.2 829,073 - -1.0 829,150 - -0.7 829,154 + -1.4 829,164 + -1.0 829,170 - -1.3 829,172 - +0.2 829,177 + -0.8 829,243 - DVU0741 0.20 -1.8 829,286 + DVU0741 0.29 -0.2 829,289 - DVU0741 0.30 -1.0 829,368 - DVU0741 0.47 -0.0 829,389 - DVU0741 0.51 -1.1 829,422 + DVU0741 0.58 -0.5 829,512 - DVU0741 0.77 -0.6 829,527 + DVU0741 0.80 -2.0 829,636 - +0.2 829,710 + -0.8 829,737 + DVU0742 0.13 -0.6 829,747 + DVU0742 0.14 -0.8 829,755 - DVU0742 0.15 +1.2 829,755 - DVU0742 0.15 -0.8 829,819 + DVU0742 0.23 -0.9 829,897 - DVU0742 0.32 -1.6 829,907 - DVU0742 0.33 -1.4 829,911 + DVU0742 0.34 -0.5 829,951 + DVU0742 0.38 +0.0 829,992 + DVU0742 0.43 -1.1 830,000 - DVU0742 0.44 -1.5 830,000 - DVU0742 0.44 -0.8 830,001 - DVU0742 0.44 +1.3 830,040 - DVU0742 0.49 -0.8 830,086 + DVU0742 0.54 -0.4 830,149 - DVU0742 0.62 -1.2 830,226 + DVU0742 0.71 -0.2 830,252 - DVU0742 0.74 +0.0 830,252 - DVU0742 0.74 -0.8 830,290 + DVU0742 0.79 -0.4 830,298 - DVU0742 0.80 -1.2 830,300 + DVU0742 0.80 -1.1 830,344 - DVU0742 0.85 -0.2 830,363 + DVU0742 0.88 +0.2 830,405 - -1.4 830,565 + -0.1 830,572 - -0.7 830,591 - +0.4 830,715 + DVU0743 0.12 -0.6 830,725 + DVU0743 0.13 +0.0 830,725 + DVU0743 0.13 -0.1 830,839 - DVU0743 0.18 +0.6 830,854 - DVU0743 0.19 -1.0 830,929 + DVU0743 0.23 +0.3 830,958 - DVU0743 0.24 -0.2 830,958 - DVU0743 0.24 -0.5 831,050 + DVU0743 0.29 +2.2 831,069 - DVU0743 0.30 -0.4 831,077 - DVU0743 0.30 -0.9 831,227 - DVU0743 0.38 -0.6 831,249 + DVU0743 0.39 +0.2 831,282 + DVU0743 0.41 -0.2 831,442 + DVU0743 0.49 +0.5 831,457 + DVU0743 0.49 -0.0
Or see this region's nucleotide sequence