Experiment: MoLS4 with L-Serine (N) without Molybdate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1830 and DORF37657 are separated by 94 nucleotides DORF37657 and DORF37658 overlap by 154 nucleotides DORF37658 and DVU1832 are separated by 353 nucleotides DVU1832 and ppsA are separated by 339 nucleotides
DVU1830: DVU1830 - hypothetical protein (TIGR), at 1,895,706 to 1,896,770
DVU1830
DORF37657: DORF37657 - SEED: Magnesium and cobalt efflux protein CorC, at 1,896,865 to 1,897,251
DORF37657
DORF37658: DORF37658 - SEED: Magnesium and cobalt efflux protein CorC, at 1,897,098 to 1,897,691
DORF37658
DVU1832: DVU1832 - hypothetical protein (TIGR), at 1,898,045 to 1,898,146
DVU1832
DVU1833: ppsA - phosphoenolpyruvate synthase, putative (TIGR), at 1,898,486 to 1,902,061
ppsA
Position (kb)
1897
1898 Strain fitness (log2 ratio)
-2
-1
0
1 at 1896.115 kb on + strand, within DVU1830 at 1896.123 kb on - strand, within DVU1830 at 1896.123 kb on - strand, within DVU1830 at 1896.158 kb on + strand, within DVU1830 at 1896.385 kb on - strand, within DVU1830 at 1896.532 kb on + strand, within DVU1830 at 1896.535 kb on - strand, within DVU1830 at 1896.611 kb on + strand, within DVU1830 at 1896.716 kb on - strand at 1896.834 kb on + strand at 1896.842 kb on - strand at 1896.895 kb on + strand at 1897.074 kb on - strand, within DORF37657 at 1897.131 kb on - strand at 1897.197 kb on + strand at 1897.367 kb on - strand, within DORF37658 at 1897.401 kb on - strand, within DORF37658 at 1897.478 kb on + strand, within DORF37658 at 1897.552 kb on + strand, within DORF37658 at 1897.607 kb on - strand, within DORF37658 at 1897.719 kb on + strand at 1897.883 kb on + strand at 1897.901 kb on - strand at 1898.233 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N) without Molybdate remove 1,896,115 + DVU1830 0.38 -1.9 1,896,123 - DVU1830 0.39 +0.3 1,896,123 - DVU1830 0.39 -0.3 1,896,158 + DVU1830 0.42 -0.2 1,896,385 - DVU1830 0.64 -0.6 1,896,532 + DVU1830 0.78 -0.3 1,896,535 - DVU1830 0.78 -0.7 1,896,611 + DVU1830 0.85 +0.2 1,896,716 - +0.7 1,896,834 + -0.8 1,896,842 - -1.4 1,896,895 + +0.3 1,897,074 - DORF37657 0.54 -0.3 1,897,131 - +0.1 1,897,197 + -0.5 1,897,367 - DORF37658 0.45 -0.7 1,897,401 - DORF37658 0.51 -0.3 1,897,478 + DORF37658 0.64 -0.3 1,897,552 + DORF37658 0.76 -0.0 1,897,607 - DORF37658 0.86 -0.5 1,897,719 + -0.1 1,897,883 + -0.0 1,897,901 - -0.2 1,898,233 - +0.4
Or see this region's nucleotide sequence