Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c36240

Experiment: m.b. Doxycycline hyclate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.002 mg/ml
3,790,653	+				+0.6
3,790,653	+				+0.3
3,790,653	+				+0.6
3,790,653	+				-0.5
3,790,653	+				-1.3
3,790,653	+				+0.6
3,790,653	+				+0.5
3,790,661	-				-1.2
3,790,661	-				-0.3
3,790,671	+				-1.8
3,790,751	-				-0.2
3,790,762	-				-1.4
3,790,770	-				-0.5
3,790,782	+				+0.9
3,790,801	-				+0.0
3,790,801	-				-0.5
3,790,872	-				+1.0
3,790,887	+				+0.2
3,790,890	+				-0.9
3,790,927	+				-0.4
3,790,937	+				-0.5
3,790,937	+				+0.4
3,790,937	+				-0.4
3,790,937	+				-0.4
3,790,937	+				+0.2
3,790,937	+				+0.4
3,790,945	-				-1.5
3,790,945	-				+0.3
3,790,945	-				-0.7
3,790,945	-				-0.2
3,790,966	+				+0.1
3,790,968	+				+0.7
3,790,978	+				-1.1
3,790,986	-		PGA1_c36230	0.10	+0.0
3,790,998	+		PGA1_c36230	0.18	+0.3
3,791,065	+		PGA1_c36230	0.59	-0.4
3,791,092	-		PGA1_c36230	0.76	-0.1
3,791,110	+		PGA1_c36230	0.87	-0.3
3,791,133	-				+0.3
3,791,179	+				+0.8
3,791,192	-				-0.5
3,791,199	+				+0.1
3,791,207	-				-0.6
3,791,207	-				+0.6
3,791,207	-				+0.8
3,791,207	-				-0.1
3,791,209	+				-1.0
3,791,248	+				+1.0
3,791,256	-				+0.3
3,791,257	+				-2.1
3,791,263	-				-0.7
3,791,267	+				-0.2
3,791,277	+				-0.1
3,791,315	-				-0.2
3,791,390	-		PGA1_c36240	0.14	-0.8
3,791,411	+		PGA1_c36240	0.16	-0.7
3,791,498	+		PGA1_c36240	0.23	-0.1
3,791,513	+		PGA1_c36240	0.24	+0.1
3,791,513	+		PGA1_c36240	0.24	+0.2
3,791,513	+		PGA1_c36240	0.24	-0.0
3,791,513	+		PGA1_c36240	0.24	+0.4
3,791,521	-		PGA1_c36240	0.25	+0.0
3,791,521	-		PGA1_c36240	0.25	-0.6
3,791,521	-		PGA1_c36240	0.25	+1.3
3,791,521	-		PGA1_c36240	0.25	+1.3
3,791,538	+		PGA1_c36240	0.26	+0.8
3,791,617	-		PGA1_c36240	0.33	-0.1
3,791,624	+		PGA1_c36240	0.34	+0.8
3,791,635	-		PGA1_c36240	0.35	+1.1
3,791,643	-		PGA1_c36240	0.35	+1.6
3,791,673	-		PGA1_c36240	0.38	+0.3
3,791,684	+		PGA1_c36240	0.39	+0.7
3,791,803	+		PGA1_c36240	0.49	-0.5
3,791,817	+		PGA1_c36240	0.50	-0.2
3,791,863	+		PGA1_c36240	0.54	+1.2
3,791,893	+		PGA1_c36240	0.56	-0.2
3,791,916	-		PGA1_c36240	0.58	+0.9
3,791,986	+		PGA1_c36240	0.64	+0.9
3,791,994	-		PGA1_c36240	0.65	+0.1
3,791,994	-		PGA1_c36240	0.65	+0.1
3,792,042	+		PGA1_c36240	0.69	-0.1
3,792,050	+		PGA1_c36240	0.70	-0.9
3,792,050	-		PGA1_c36240	0.70	-0.3
3,792,050	-		PGA1_c36240	0.70	+0.5
3,792,050	-		PGA1_c36240	0.70	+0.4
3,792,089	+		PGA1_c36240	0.73	+1.2
3,792,101	-		PGA1_c36240	0.74	+0.4
3,792,150	-		PGA1_c36240	0.78	-0.3
3,792,150	-		PGA1_c36240	0.78	+0.6
3,792,326	+				+0.3
3,792,363	+				+1.1
3,792,371	-				+0.7
3,792,378	-				-1.6
3,792,417	+				-0.2
3,792,425	-				+0.2
3,792,427	+				+0.6
3,792,427	+				+0.2
3,792,427	+				+0.4
3,792,428	+				-0.2
3,792,428	+				+0.3
3,792,435	-				-0.9
3,792,436	-				+0.2
3,792,465	+				+0.1
3,792,499	-				+0.5
3,792,499	-				-0.6
3,792,505	-				+0.5
3,792,542	-				-0.1
3,792,557	+				-0.4
3,792,557	+				+0.0
3,792,557	+				-0.4
3,792,557	+				-1.6
3,792,565	-				-0.3
3,792,565	-				-1.1
3,792,565	-				-0.5
3,792,565	-				-2.8
3,792,596	+		PGA1_c36250	0.12	+1.0
3,792,596	+		PGA1_c36250	0.12	+0.3
3,792,596	+		PGA1_c36250	0.12	-0.5
3,792,596	+		PGA1_c36250	0.12	+0.3
3,792,633	+		PGA1_c36250	0.15	+0.7
3,792,634	-		PGA1_c36250	0.16	+0.6
3,792,641	-		PGA1_c36250	0.16	-0.7
3,792,647	-		PGA1_c36250	0.17	-1.8
3,792,648	-		PGA1_c36250	0.17	-0.8
3,792,692	-		PGA1_c36250	0.20	+0.5
3,792,697	-		PGA1_c36250	0.21	-0.3
3,792,697	-		PGA1_c36250	0.21	+0.4
3,792,738	-		PGA1_c36250	0.24	+0.2
3,792,803	-		PGA1_c36250	0.29	-3.2
3,792,862	-		PGA1_c36250	0.34	-0.1
3,792,902	+		PGA1_c36250	0.37	-0.2
3,792,902	+		PGA1_c36250	0.37	-0.2
3,792,917	+		PGA1_c36250	0.38	-0.5
3,792,917	+		PGA1_c36250	0.38	+0.6
3,792,917	+		PGA1_c36250	0.38	-0.1
3,792,917	+		PGA1_c36250	0.38	+1.1
3,792,917	+		PGA1_c36250	0.38	-0.3
3,792,941	-		PGA1_c36250	0.40	-0.8
3,792,951	+		PGA1_c36250	0.41	-0.3
3,792,951	+		PGA1_c36250	0.41	-0.4
3,792,951	+		PGA1_c36250	0.41	-0.3
3,792,959	-		PGA1_c36250	0.42	-1.0
3,792,959	-		PGA1_c36250	0.42	+0.2
3,792,959	-		PGA1_c36250	0.42	+0.4
3,792,962	+		PGA1_c36250	0.42	+1.8
3,792,970	-		PGA1_c36250	0.43	+0.0
3,793,003	+		PGA1_c36250	0.45	+0.3
3,793,003	+		PGA1_c36250	0.45	-0.4
3,793,011	-		PGA1_c36250	0.46	-0.4
3,793,025	+		PGA1_c36250	0.47	-0.9
3,793,025	+		PGA1_c36250	0.47	+0.7
3,793,033	-		PGA1_c36250	0.48	+1.2
3,793,033	-		PGA1_c36250	0.48	-0.7
3,793,067	+		PGA1_c36250	0.50	-0.8
3,793,146	+		PGA1_c36250	0.57	-0.4
3,793,157	+		PGA1_c36250	0.58	-0.0
3,793,163	+		PGA1_c36250	0.58	-0.6
3,793,163	+		PGA1_c36250	0.58	+0.7
3,793,164	-		PGA1_c36250	0.58	+0.7
3,793,165	-		PGA1_c36250	0.58	+0.8
3,793,165	-		PGA1_c36250	0.58	+0.2
3,793,171	-		PGA1_c36250	0.59	-0.4
3,793,178	-		PGA1_c36250	0.59	+0.5
3,793,182	+		PGA1_c36250	0.60	-0.7
3,793,182	+		PGA1_c36250	0.60	-1.0
3,793,190	-		PGA1_c36250	0.60	-2.3
3,793,190	-		PGA1_c36250	0.60	+0.2
3,793,190	-		PGA1_c36250	0.60	-0.1
3,793,205	+		PGA1_c36250	0.62	-1.3
3,793,225	+		PGA1_c36250	0.63	+0.2
3,793,226	+		PGA1_c36250	0.63	+0.2
3,793,233	+		PGA1_c36250	0.64	+0.6
3,793,243	-		PGA1_c36250	0.65	-0.1
3,793,247	+		PGA1_c36250	0.65	+0.2
3,793,248	+		PGA1_c36250	0.65	-0.7
3,793,263	+		PGA1_c36250	0.66	-0.4
3,793,271	+		PGA1_c36250	0.67	+0.6
3,793,271	-		PGA1_c36250	0.67	+0.4
3,793,281	+		PGA1_c36250	0.68	-1.2
3,793,283	-		PGA1_c36250	0.68	-0.3
3,793,331	+		PGA1_c36250	0.72	-0.2
3,793,334	-		PGA1_c36250	0.72	-0.3
3,793,373	+		PGA1_c36250	0.75	+0.6
3,793,373	+		PGA1_c36250	0.75	+0.0
3,793,383	+		PGA1_c36250	0.76	+0.2
3,793,397	-		PGA1_c36250	0.77	-0.3
3,793,398	-		PGA1_c36250	0.77	+0.6
3,793,407	+		PGA1_c36250	0.78	+0.2
3,793,407	+		PGA1_c36250	0.78	-0.1