Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33180

Experiment: m.b. Doxycycline hyclate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.002 mg/ml
3,476,710	+		PGA1_c33160	0.56	-0.5
3,476,710	+		PGA1_c33160	0.56	-1.5
3,476,710	+		PGA1_c33160	0.56	-1.1
3,476,710	+		PGA1_c33160	0.56	-1.3
3,476,715	+		PGA1_c33160	0.57	-0.5
3,476,716	-		PGA1_c33160	0.58	+0.0
3,476,718	-		PGA1_c33160	0.58	-0.3
3,476,723	-		PGA1_c33160	0.59	+0.6
3,476,760	+		PGA1_c33160	0.65	-0.8
3,476,769	+		PGA1_c33160	0.67	+0.1
3,476,778	-		PGA1_c33160	0.68	+0.2
3,476,818	-		PGA1_c33160	0.75	+0.7
3,476,865	-		PGA1_c33160	0.84	+0.2
3,476,895	-		PGA1_c33160	0.89	+0.1
3,477,067	-				+0.2
3,477,085	-				+1.0
3,477,182	+				-0.4
3,477,195	-				-0.6
3,477,197	+		PGA1_c33170	0.10	-0.1
3,477,223	-		PGA1_c33170	0.16	-0.7
3,477,286	-		PGA1_c33170	0.30	+0.6
3,477,437	-		PGA1_c33170	0.63	-0.9
3,477,440	+		PGA1_c33170	0.63	-0.4
3,477,477	-		PGA1_c33170	0.71	-0.1
3,477,502	+		PGA1_c33170	0.77	-0.6
3,477,502	+		PGA1_c33170	0.77	-0.0
3,477,510	-		PGA1_c33170	0.79	+0.3
3,477,512	+		PGA1_c33170	0.79	+0.5
3,477,520	-		PGA1_c33170	0.81	+0.4
3,477,534	+		PGA1_c33170	0.84	-1.1
3,477,548	+		PGA1_c33170	0.87	-1.2
3,477,648	+				+1.0
3,477,649	+				-1.3
3,477,649	+				-0.3
3,477,649	+				-0.2
3,477,649	+				-0.2
3,477,649	+				-0.2
3,477,649	+				-0.5
3,477,649	+				-0.9
3,477,649	+				+1.1
3,477,649	+				-1.5
3,477,649	+				-1.0
3,477,657	-				-0.7
3,477,657	-				+0.7
3,477,657	-				-0.2
3,477,657	-				+0.1
3,477,657	-				+0.2
3,477,657	-				-0.5
3,477,657	-				-0.1
3,477,694	+				+0.4
3,477,713	+				+0.4
3,477,782	+				+0.4
3,477,782	+				-0.3
3,477,790	-				-1.2
3,477,840	+		PGA1_c33180	0.12	+0.2
3,477,840	+		PGA1_c33180	0.12	+0.3
3,477,847	+		PGA1_c33180	0.12	-0.6
3,477,853	-		PGA1_c33180	0.13	-0.3
3,477,908	-		PGA1_c33180	0.18	+0.3
3,478,035	+		PGA1_c33180	0.28	-0.0
3,478,077	+		PGA1_c33180	0.32	+0.9
3,478,078	+		PGA1_c33180	0.32	-0.4
3,478,080	-		PGA1_c33180	0.32	+0.2
3,478,080	-		PGA1_c33180	0.32	+0.9
3,478,097	+		PGA1_c33180	0.34	+0.5
3,478,158	+		PGA1_c33180	0.39	-0.9
3,478,216	+		PGA1_c33180	0.44	+0.5
3,478,216	+		PGA1_c33180	0.44	-0.5
3,478,224	-		PGA1_c33180	0.45	-0.8
3,478,224	-		PGA1_c33180	0.45	-0.1
3,478,300	+		PGA1_c33180	0.51	+0.9
3,478,349	+		PGA1_c33180	0.55	-1.3
3,478,358	-		PGA1_c33180	0.56	+0.6
3,478,378	-		PGA1_c33180	0.58	-0.1
3,478,378	-		PGA1_c33180	0.58	-0.3
3,478,397	-		PGA1_c33180	0.59	-1.6
3,478,430	-		PGA1_c33180	0.62	+0.3
3,478,433	+		PGA1_c33180	0.62	+0.9
3,478,433	+		PGA1_c33180	0.62	+0.4
3,478,433	+		PGA1_c33180	0.62	-0.3
3,478,433	+		PGA1_c33180	0.62	-0.3
3,478,433	+		PGA1_c33180	0.62	-0.6
3,478,433	+		PGA1_c33180	0.62	+0.6
3,478,441	-		PGA1_c33180	0.63	+0.2
3,478,441	-		PGA1_c33180	0.63	-0.5
3,478,469	+		PGA1_c33180	0.65	-0.3
3,478,566	+		PGA1_c33180	0.74	+0.0
3,478,658	+		PGA1_c33180	0.82	+0.5
3,478,663	+		PGA1_c33180	0.82	-0.1
3,478,666	-		PGA1_c33180	0.82	-0.2
3,478,666	-		PGA1_c33180	0.82	-0.0
3,478,695	+		PGA1_c33180	0.85	-1.8
3,478,695	+		PGA1_c33180	0.85	+0.3
3,478,695	+		PGA1_c33180	0.85	-0.0
3,478,703	-		PGA1_c33180	0.85	-1.6
3,478,703	-		PGA1_c33180	0.85	+0.7
3,478,710	-		PGA1_c33180	0.86	+0.4
3,478,755	-		PGA1_c33180	0.90	+0.3
3,478,845	+				+0.7
3,478,845	+				+1.7
3,478,852	+				+0.5
3,478,891	+				+0.4
3,478,927	-				+1.5
3,478,934	-				+0.3
3,478,934	-				+0.3
3,478,934	-				+0.7
3,478,971	+				+0.8
3,478,971	+				+0.6
3,478,973	-				+0.1
3,478,973	-				+1.2
3,478,973	-				+0.2
3,479,003	+		PGA1_c33190	0.10	+0.8
3,479,011	-		PGA1_c33190	0.12	+0.5
3,479,036	+		PGA1_c33190	0.20	+1.1
3,479,041	+		PGA1_c33190	0.21	+1.1
3,479,101	+		PGA1_c33190	0.39	+1.8
3,479,101	+		PGA1_c33190	0.39	+0.9
3,479,101	+		PGA1_c33190	0.39	+1.4
3,479,109	-		PGA1_c33190	0.41	+1.3
3,479,109	-		PGA1_c33190	0.41	+0.6
3,479,109	-		PGA1_c33190	0.41	+1.5
3,479,188	+		PGA1_c33190	0.64	+0.5
3,479,389	-				-1.8
3,479,405	-		PGA1_c33200	0.13	-1.5
3,479,425	+		PGA1_c33200	0.17	+0.2
3,479,425	+		PGA1_c33200	0.17	+0.3
3,479,425	+		PGA1_c33200	0.17	+0.1
3,479,473	-		PGA1_c33200	0.28	+0.1
3,479,482	-		PGA1_c33200	0.30	-0.4
3,479,509	+		PGA1_c33200	0.36	-0.3
3,479,510	+		PGA1_c33200	0.36	+0.5
3,479,518	-		PGA1_c33200	0.38	+0.1
3,479,518	-		PGA1_c33200	0.38	-0.5
3,479,570	-		PGA1_c33200	0.50	-1.3
3,479,620	+		PGA1_c33200	0.61	-0.9
3,479,626	+		PGA1_c33200	0.62	+0.4
3,479,629	-		PGA1_c33200	0.63	-0.2
3,479,631	+		PGA1_c33200	0.63	+2.0
3,479,675	+		PGA1_c33200	0.73	+0.2
3,479,694	+		PGA1_c33200	0.77	+1.2
3,479,714	+		PGA1_c33200	0.82	-0.1
3,479,736	-		PGA1_c33200	0.87	+0.0
3,479,747	+		PGA1_c33200	0.89	-0.3
3,479,796	-				+0.3
3,479,796	-				+0.4
3,479,807	+				-0.9
3,479,807	+				-0.3
3,479,815	-				-0.2
3,479,817	-				+0.9
3,479,863	+				+0.0