Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22670

Experiment: m.b. Doxycycline hyclate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.002 mg/ml
2,349,644	-				-0.1
2,349,719	+		PGA1_c22660	0.12	-0.1
2,349,740	+		PGA1_c22660	0.14	-0.1
2,349,746	+		PGA1_c22660	0.15	-0.4
2,349,746	+		PGA1_c22660	0.15	+0.2
2,349,754	-		PGA1_c22660	0.15	-0.9
2,349,754	-		PGA1_c22660	0.15	-1.5
2,349,852	+		PGA1_c22660	0.25	-0.3
2,349,852	+		PGA1_c22660	0.25	+0.4
2,349,860	-		PGA1_c22660	0.26	+0.2
2,349,860	-		PGA1_c22660	0.26	+0.0
2,349,869	+		PGA1_c22660	0.27	-0.7
2,349,869	+		PGA1_c22660	0.27	+0.1
2,349,877	-		PGA1_c22660	0.27	-1.2
2,349,886	+		PGA1_c22660	0.28	+0.1
2,349,886	+		PGA1_c22660	0.28	+0.7
2,349,886	+		PGA1_c22660	0.28	+0.1
2,349,891	+		PGA1_c22660	0.29	-2.4
2,349,891	+		PGA1_c22660	0.29	-0.4
2,349,894	-		PGA1_c22660	0.29	-0.2
2,349,899	-		PGA1_c22660	0.29	+0.2
2,349,899	-		PGA1_c22660	0.29	-0.2
2,349,899	-		PGA1_c22660	0.29	-0.8
2,349,901	-		PGA1_c22660	0.30	-2.3
2,349,937	-		PGA1_c22660	0.33	-0.5
2,349,971	+		PGA1_c22660	0.36	+1.5
2,349,971	+		PGA1_c22660	0.36	-2.0
2,349,971	+		PGA1_c22660	0.36	+0.0
2,349,971	+		PGA1_c22660	0.36	+0.3
2,349,971	+		PGA1_c22660	0.36	-0.8
2,349,979	-		PGA1_c22660	0.37	+0.2
2,349,979	-		PGA1_c22660	0.37	+0.3
2,349,979	-		PGA1_c22660	0.37	+0.3
2,349,979	-		PGA1_c22660	0.37	+0.4
2,349,989	-		PGA1_c22660	0.38	+0.8
2,350,042	+		PGA1_c22660	0.43	-0.4
2,350,050	-		PGA1_c22660	0.44	+0.2
2,350,050	-		PGA1_c22660	0.44	-0.3
2,350,055	-		PGA1_c22660	0.45	-0.0
2,350,095	-		PGA1_c22660	0.48	-0.1
2,350,101	-		PGA1_c22660	0.49	+0.3
2,350,127	+		PGA1_c22660	0.52	-0.8
2,350,135	-		PGA1_c22660	0.52	-0.1
2,350,171	+		PGA1_c22660	0.56	+0.1
2,350,172	+		PGA1_c22660	0.56	-0.6
2,350,174	-		PGA1_c22660	0.56	-0.0
2,350,186	+		PGA1_c22660	0.57	-0.1
2,350,199	-		PGA1_c22660	0.59	+0.7
2,350,238	+		PGA1_c22660	0.62	-0.2
2,350,238	+		PGA1_c22660	0.62	-0.3
2,350,238	+		PGA1_c22660	0.62	+0.1
2,350,246	-		PGA1_c22660	0.63	+0.4
2,350,246	-		PGA1_c22660	0.63	-1.5
2,350,313	+		PGA1_c22660	0.70	-1.3
2,350,313	+		PGA1_c22660	0.70	-0.9
2,350,321	-		PGA1_c22660	0.70	+0.2
2,350,340	+		PGA1_c22660	0.72	+0.2
2,350,348	-		PGA1_c22660	0.73	-0.2
2,350,387	+		PGA1_c22660	0.77	+0.1
2,350,395	-		PGA1_c22660	0.78	-1.3
2,350,395	-		PGA1_c22660	0.78	+0.6
2,350,412	+		PGA1_c22660	0.79	-1.5
2,350,483	-		PGA1_c22660	0.86	-0.7
2,350,545	+				-0.1
2,350,586	-				+0.0
2,350,590	+				-1.6
2,350,653	-		PGA1_c22670	0.16	+0.2
2,350,656	+		PGA1_c22670	0.17	-0.6
2,350,666	+		PGA1_c22670	0.22	+1.4
2,350,666	-		PGA1_c22670	0.22	+0.6
2,350,741	+		PGA1_c22670	0.61	+1.0
2,350,749	-		PGA1_c22670	0.66	-1.0
2,350,769	-		PGA1_c22670	0.76	+0.5
2,350,769	-		PGA1_c22670	0.76	+0.6
2,350,769	-		PGA1_c22670	0.76	+0.1
2,350,892	+		PGA1_c22680	0.27	-1.1
2,350,913	-		PGA1_c22680	0.38	-0.6
2,350,913	-		PGA1_c22680	0.38	+0.3
2,350,915	-		PGA1_c22680	0.39	-0.2
2,350,937	-		PGA1_c22680	0.50	-0.5
2,350,985	-		PGA1_c22680	0.75	-0.4
2,351,017	+				+0.7
2,351,018	+				-0.4
2,351,018	+				-0.9
2,351,018	+				+0.6
2,351,018	+				-0.6
2,351,018	+				+0.2
2,351,026	-				+0.1
2,351,026	-				-0.5
2,351,036	-				-0.0
2,351,357	-		PGA1_c22690	0.76	-1.8
2,351,440	-				-0.5
2,351,543	+		PGA1_c22700	0.17	+0.1
2,351,559	+		PGA1_c22700	0.19	-0.2
2,351,666	+		PGA1_c22700	0.36	+0.6
2,351,715	+		PGA1_c22700	0.44	-0.0
2,351,746	-		PGA1_c22700	0.48	-0.2
2,351,746	-		PGA1_c22700	0.48	-0.3
2,351,806	+		PGA1_c22700	0.58	-1.4
2,351,812	+		PGA1_c22700	0.59	-0.5