Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19350

Experiment: m.b. Doxycycline hyclate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.002 mg/ml
2,012,602	+		PGA1_c19340	0.26	-0.4
2,012,602	+		PGA1_c19340	0.26	+1.2
2,012,602	+		PGA1_c19340	0.26	+0.6
2,012,602	+		PGA1_c19340	0.26	+0.6
2,012,602	+		PGA1_c19340	0.26	-0.2
2,012,602	+		PGA1_c19340	0.26	+0.4
2,012,602	+		PGA1_c19340	0.26	-1.2
2,012,602	+		PGA1_c19340	0.26	-0.5
2,012,602	+		PGA1_c19340	0.26	-0.6
2,012,602	+		PGA1_c19340	0.26	+0.3
2,012,736	-		PGA1_c19340	0.65	+1.1
2,012,793	-		PGA1_c19340	0.82	-1.7
2,012,803	-		PGA1_c19340	0.85	+0.3
2,012,957	-				-1.0
2,013,050	+		PGA1_c19350	0.15	-1.5
2,013,076	+		PGA1_c19350	0.17	+0.8
2,013,084	-		PGA1_c19350	0.18	+0.4
2,013,102	+		PGA1_c19350	0.19	-0.5
2,013,130	+		PGA1_c19350	0.21	-0.8
2,013,177	+		PGA1_c19350	0.24	+0.1
2,013,218	-		PGA1_c19350	0.27	+0.4
2,013,280	+		PGA1_c19350	0.31	-1.3
2,013,287	+		PGA1_c19350	0.32	+0.4
2,013,320	+		PGA1_c19350	0.34	+0.5
2,013,320	+		PGA1_c19350	0.34	-0.3
2,013,338	+		PGA1_c19350	0.36	-0.2
2,013,343	+		PGA1_c19350	0.36	-0.8
2,013,348	+		PGA1_c19350	0.36	+0.6
2,013,368	+		PGA1_c19350	0.38	-0.5
2,013,376	-		PGA1_c19350	0.38	-0.6
2,013,438	+		PGA1_c19350	0.43	+0.0
2,013,535	+		PGA1_c19350	0.50	-0.3
2,013,551	+		PGA1_c19350	0.51	+0.2
2,013,589	-		PGA1_c19350	0.53	+2.0
2,013,638	-		PGA1_c19350	0.57	-1.9
2,013,638	-		PGA1_c19350	0.57	+0.2
2,013,741	+		PGA1_c19350	0.64	-0.2
2,013,758	+		PGA1_c19350	0.65	+0.1
2,013,766	-		PGA1_c19350	0.66	+1.2
2,013,828	-		PGA1_c19350	0.70	+0.5
2,013,830	+		PGA1_c19350	0.70	-0.6
2,013,858	+		PGA1_c19350	0.72	+0.3
2,013,874	-		PGA1_c19350	0.74	+0.3
2,013,885	+		PGA1_c19350	0.74	-0.5
2,013,892	-		PGA1_c19350	0.75	-0.1
2,013,907	+		PGA1_c19350	0.76	-0.3
2,013,915	-		PGA1_c19350	0.77	+0.1
2,013,915	-		PGA1_c19350	0.77	-1.4
2,013,946	+		PGA1_c19350	0.79	-1.1
2,013,951	+		PGA1_c19350	0.79	-0.5
2,013,996	+		PGA1_c19350	0.82	+0.7
2,013,996	+		PGA1_c19350	0.82	+0.4
2,014,009	+		PGA1_c19350	0.83	-0.6
2,014,085	+		PGA1_c19350	0.89	+0.4
2,014,086	-		PGA1_c19350	0.89	-0.1
2,014,087	+		PGA1_c19350	0.89	-0.3
2,014,100	+		PGA1_c19350	0.90	-0.8
2,014,171	+				+0.8
2,014,179	-				+0.6
2,014,201	+				+0.0
2,014,201	+				+0.7
2,014,226	+				-0.3
2,014,285	+				-0.5
2,014,336	+				-0.0
2,014,344	-				-0.4
2,014,344	-				-0.2
2,014,354	-				-0.5
2,014,447	+		PGA1_c19360	0.11	+0.0
2,014,508	-		PGA1_c19360	0.15	-1.1
2,014,659	+		PGA1_c19360	0.23	-0.4
2,014,676	-		PGA1_c19360	0.24	-0.5
2,014,685	-		PGA1_c19360	0.24	+0.2
2,014,687	+		PGA1_c19360	0.24	-0.3
2,014,687	+		PGA1_c19360	0.24	+1.1
2,014,687	+		PGA1_c19360	0.24	-0.7
2,014,734	-		PGA1_c19360	0.27	+0.8
2,014,745	+		PGA1_c19360	0.28	+0.3
2,014,747	-		PGA1_c19360	0.28	-0.6
2,014,749	+		PGA1_c19360	0.28	+0.1
2,014,750	+		PGA1_c19360	0.28	+0.2
2,014,753	-		PGA1_c19360	0.28	+0.2
2,014,753	-		PGA1_c19360	0.28	+1.1
2,014,760	+		PGA1_c19360	0.29	+0.2
2,014,763	-		PGA1_c19360	0.29	-0.0
2,014,807	+		PGA1_c19360	0.31	-0.4
2,014,829	+		PGA1_c19360	0.32	+0.6
2,014,837	-		PGA1_c19360	0.33	-1.3
2,014,837	-		PGA1_c19360	0.33	+1.1
2,014,837	-		PGA1_c19360	0.33	-0.3
2,014,837	-		PGA1_c19360	0.33	-0.3
2,014,839	-		PGA1_c19360	0.33	+1.1
2,014,941	+		PGA1_c19360	0.39	-0.7
2,014,941	+		PGA1_c19360	0.39	-0.9
2,014,941	+		PGA1_c19360	0.39	+0.3
2,014,946	+		PGA1_c19360	0.39	+0.4
2,014,954	-		PGA1_c19360	0.39	+0.2
2,014,954	-		PGA1_c19360	0.39	-0.2
2,014,978	+		PGA1_c19360	0.41	+0.6
2,014,986	-		PGA1_c19360	0.41	-0.6
2,015,016	+		PGA1_c19360	0.43	+1.6
2,015,017	-		PGA1_c19360	0.43	+0.6
2,015,042	+		PGA1_c19360	0.44	+0.4
2,015,050	-		PGA1_c19360	0.45	-2.0
2,015,076	-		PGA1_c19360	0.46	-0.6
2,015,078	+		PGA1_c19360	0.46	+0.3
2,015,081	-		PGA1_c19360	0.46	+1.0
2,015,082	+		PGA1_c19360	0.46	-1.9
2,015,082	+		PGA1_c19360	0.46	-0.7
2,015,082	+		PGA1_c19360	0.46	-0.3
2,015,090	-		PGA1_c19360	0.47	+0.4
2,015,090	-		PGA1_c19360	0.47	-0.1
2,015,090	-		PGA1_c19360	0.47	-0.3
2,015,090	-		PGA1_c19360	0.47	+0.6
2,015,101	+		PGA1_c19360	0.47	-1.2
2,015,129	+		PGA1_c19360	0.49	-0.0
2,015,170	-		PGA1_c19360	0.51	-0.2
2,015,171	-		PGA1_c19360	0.51	-0.8
2,015,177	+		PGA1_c19360	0.52	-0.3
2,015,191	-		PGA1_c19360	0.52	-0.1