Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18340

Experiment: m.b. Doxycycline hyclate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.002 mg/ml
1,914,998	+				+0.8
1,915,023	-				+0.3
1,915,023	-				+0.5
1,915,044	-				+0.1
1,915,046	-				+0.8
1,915,060	-				-0.8
1,915,062	+				+0.1
1,915,071	-				+0.9
1,915,102	+				-0.3
1,915,102	+				+0.1
1,915,166	+		PGA1_c18330	0.13	-0.5
1,915,166	+		PGA1_c18330	0.13	+0.7
1,915,232	+		PGA1_c18330	0.20	+0.2
1,915,240	-		PGA1_c18330	0.21	+0.1
1,915,291	-		PGA1_c18330	0.27	+0.9
1,915,300	-		PGA1_c18330	0.28	-0.2
1,915,316	+		PGA1_c18330	0.30	-0.9
1,915,316	+		PGA1_c18330	0.30	-0.4
1,915,324	-		PGA1_c18330	0.31	-0.2
1,915,324	-		PGA1_c18330	0.31	-0.3
1,915,324	-		PGA1_c18330	0.31	-0.7
1,915,324	-		PGA1_c18330	0.31	+0.3
1,915,324	-		PGA1_c18330	0.31	-0.2
1,915,331	+		PGA1_c18330	0.31	+0.3
1,915,331	+		PGA1_c18330	0.31	+0.4
1,915,429	-		PGA1_c18330	0.42	-1.3
1,915,506	+		PGA1_c18330	0.51	+0.2
1,915,525	+		PGA1_c18330	0.53	+0.6
1,915,550	+		PGA1_c18330	0.56	-0.1
1,915,556	-		PGA1_c18330	0.56	-0.9
1,915,596	-		PGA1_c18330	0.61	-0.3
1,915,609	-		PGA1_c18330	0.62	+0.2
1,915,658	+		PGA1_c18330	0.68	-0.6
1,915,666	-		PGA1_c18330	0.69	-1.2
1,915,834	-		PGA1_c18330	0.87	+0.7
1,915,895	-				+1.2
1,915,920	+				+0.1
1,915,930	+				+0.2
1,915,944	+				+0.3
1,915,956	+				-0.5
1,915,956	+				+0.7
1,915,964	-				+0.3
1,915,964	-				+0.8
1,915,964	-				-0.9
1,916,091	+		PGA1_c18340	0.32	+0.6
1,916,091	+		PGA1_c18340	0.32	+0.3
1,916,206	+		PGA1_c18340	0.57	+1.4
1,916,279	+		PGA1_c18340	0.73	-0.2
1,916,279	+		PGA1_c18340	0.73	+0.6
1,916,298	+		PGA1_c18340	0.77	+0.2
1,916,321	-		PGA1_c18340	0.82	-0.3
1,916,402	+				-0.6
1,916,449	+				+0.5
1,916,451	-				-0.1
1,916,457	-				+0.3
1,916,457	-				-0.6
1,916,468	+				-0.9
1,916,512	+				+0.6
1,916,512	+				-0.2
1,916,520	-				-0.3
1,916,520	-				-0.1
1,916,520	-				-0.5
1,916,520	-				+0.1
1,916,629	+				+0.0
1,916,637	-				-0.4
1,916,659	+				+0.2
1,916,674	+		PGA1_c18350	0.11	+0.9
1,916,762	+		PGA1_c18350	0.32	-0.9
1,916,763	-		PGA1_c18350	0.32	+0.3
1,916,777	+		PGA1_c18350	0.35	-0.2
1,916,777	+		PGA1_c18350	0.35	-0.0
1,916,783	+		PGA1_c18350	0.37	-1.1
1,916,783	+		PGA1_c18350	0.37	+0.3
1,916,791	-		PGA1_c18350	0.39	+1.3
1,916,823	+		PGA1_c18350	0.46	-0.7
1,916,859	-		PGA1_c18350	0.55	-0.5
1,916,973	-		PGA1_c18350	0.81	+0.7
1,916,985	-		PGA1_c18350	0.84	+0.4
1,917,003	+		PGA1_c18350	0.88	-0.3
1,917,012	-				+0.4
1,917,036	+				+0.1
1,917,057	+				+0.3
1,917,072	+				+0.5
1,917,112	-		PGA1_c18360	0.12	-0.4
1,917,157	-		PGA1_c18360	0.20	-0.9
1,917,187	-		PGA1_c18360	0.26	+0.1
1,917,193	+		PGA1_c18360	0.27	+0.3
1,917,193	+		PGA1_c18360	0.27	-1.3
1,917,193	+		PGA1_c18360	0.27	-0.9
1,917,201	-		PGA1_c18360	0.29	-0.3
1,917,239	+		PGA1_c18360	0.36	+0.5
1,917,247	-		PGA1_c18360	0.37	+0.2
1,917,274	+		PGA1_c18360	0.42	+0.0
1,917,299	+		PGA1_c18360	0.47	+0.3
1,917,300	+		PGA1_c18360	0.47	-0.6
1,917,308	-		PGA1_c18360	0.49	+0.2
1,917,308	-		PGA1_c18360	0.49	+0.6
1,917,396	-		PGA1_c18360	0.65	+1.0
1,917,398	+		PGA1_c18360	0.66	+0.8