Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2876

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2875 and smpB are separated by 160 nucleotides DvMF_2875: DvMF_2875 - FAD linked oxidase domain protein (RefSeq), at 3,631,620 to 3,633,044 _2875 DvMF_2876: smpB - SsrA-binding protein (RefSeq), at 3,633,205 to 3,633,666 smpB Position (kb) 3633 3634Strain fitness (log2 ratio) -1 0 1at 3632.253 kb on + strand, within DvMF_2875at 3632.261 kb on - strand, within DvMF_2875at 3632.261 kb on - strand, within DvMF_2875at 3632.496 kb on + strand, within DvMF_2875at 3632.678 kb on + strand, within DvMF_2875at 3632.686 kb on - strand, within DvMF_2875at 3632.804 kb on + strand, within DvMF_2875at 3633.059 kb on - strandat 3633.203 kb on + strandat 3633.203 kb on + strandat 3633.203 kb on + strandat 3633.211 kb on - strandat 3633.928 kb on - strandat 3633.991 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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3,632,253 + DvMF_2875 0.44 -0.5
3,632,261 - DvMF_2875 0.45 -0.3
3,632,261 - DvMF_2875 0.45 -0.5
3,632,496 + DvMF_2875 0.61 -0.3
3,632,678 + DvMF_2875 0.74 -0.6
3,632,686 - DvMF_2875 0.75 -0.5
3,632,804 + DvMF_2875 0.83 -0.3
3,633,059 - -0.3
3,633,203 + -0.4
3,633,203 + -0.6
3,633,203 + -1.1
3,633,211 - -0.7
3,633,928 - -0.0
3,633,991 + -0.4

Or see this region's nucleotide sequence