Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2691 and DvMF_2692 overlap by 4 nucleotides DvMF_2692 and DvMF_2693 are separated by 195 nucleotides DvMF_2693 and DvMF_R0072 are separated by 442 nucleotides DvMF_R0072 and DvMF_2694 are separated by 223 nucleotides
DvMF_2691: DvMF_2691 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (RefSeq), at 3,404,242 to 3,405,747
_2691
DvMF_2692: DvMF_2692 - dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq), at 3,405,744 to 3,406,334
_2692
DvMF_2693: DvMF_2693 - histidine kinase (RefSeq), at 3,406,530 to 3,408,245
_2693
DvMF_R0072: DvMF_R0072 - tRNA-Ser (RefSeq), at 3,408,688 to 3,408,779
_R0072
DvMF_2694: DvMF_2694 - GDP-mannose 4,6-dehydratase (RefSeq), at 3,409,003 to 3,410,208
_2694
Position (kb)
3406
3407
3408
3409 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3405.867 kb on + strand, within DvMF_2692 at 3405.878 kb on + strand, within DvMF_2692 at 3405.878 kb on + strand, within DvMF_2692 at 3405.878 kb on + strand, within DvMF_2692 at 3405.975 kb on - strand, within DvMF_2692 at 3405.980 kb on + strand, within DvMF_2692 at 3405.988 kb on - strand, within DvMF_2692 at 3406.028 kb on + strand, within DvMF_2692 at 3406.108 kb on + strand, within DvMF_2692 at 3406.125 kb on - strand, within DvMF_2692 at 3406.173 kb on - strand, within DvMF_2692 at 3406.178 kb on - strand, within DvMF_2692 at 3406.235 kb on + strand, within DvMF_2692 at 3406.353 kb on - strand at 3406.558 kb on + strand at 3406.799 kb on + strand, within DvMF_2693 at 3407.123 kb on - strand, within DvMF_2693 at 3407.173 kb on - strand, within DvMF_2693 at 3407.204 kb on - strand, within DvMF_2693 at 3407.638 kb on + strand, within DvMF_2693 at 3407.678 kb on + strand, within DvMF_2693 at 3407.720 kb on + strand, within DvMF_2693 at 3407.844 kb on - strand, within DvMF_2693 at 3408.335 kb on + strand at 3408.627 kb on - strand at 3408.627 kb on - strand at 3408.627 kb on - strand at 3408.976 kb on + strand at 3409.148 kb on - strand, within DvMF_2694
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 3,405,867 + DvMF_2692 0.21 -1.8 3,405,878 + DvMF_2692 0.23 -2.6 3,405,878 + DvMF_2692 0.23 -1.7 3,405,878 + DvMF_2692 0.23 -1.8 3,405,975 - DvMF_2692 0.39 -2.1 3,405,980 + DvMF_2692 0.40 -1.3 3,405,988 - DvMF_2692 0.41 -0.0 3,406,028 + DvMF_2692 0.48 -0.2 3,406,108 + DvMF_2692 0.62 -2.2 3,406,125 - DvMF_2692 0.64 -1.2 3,406,173 - DvMF_2692 0.73 -1.2 3,406,178 - DvMF_2692 0.73 -1.1 3,406,235 + DvMF_2692 0.83 -0.7 3,406,353 - -0.5 3,406,558 + -1.7 3,406,799 + DvMF_2693 0.16 -1.9 3,407,123 - DvMF_2693 0.35 -2.2 3,407,173 - DvMF_2693 0.37 -3.0 3,407,204 - DvMF_2693 0.39 -1.7 3,407,638 + DvMF_2693 0.65 -1.2 3,407,678 + DvMF_2693 0.67 -1.6 3,407,720 + DvMF_2693 0.69 -2.3 3,407,844 - DvMF_2693 0.77 -1.7 3,408,335 + -0.3 3,408,627 - -0.3 3,408,627 - -0.4 3,408,627 - -0.5 3,408,976 + -0.8 3,409,148 - DvMF_2694 0.12 -0.7
Or see this region's nucleotide sequence