Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt pyrG and DvMF_0434 are separated by 517 nucleotides DvMF_0434 and DvMF_0435 are separated by 286 nucleotides DvMF_0435 and DvMF_0436 are separated by 241 nucleotides
DvMF_0433: pyrG - CTP synthetase (RefSeq), at 507,089 to 508,741
pyrG
DvMF_0434: DvMF_0434 - Phosphoribosylformylglycinamidine synthase (RefSeq), at 509,259 to 510,068
_0434
DvMF_0435: DvMF_0435 - hypothetical protein (RefSeq), at 510,355 to 510,753
_0435
DvMF_0436: DvMF_0436 - hypothetical protein (RefSeq), at 510,995 to 511,432
_0436
Position (kb) 509
510
511 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 508.932 kb on + strand at 508.938 kb on - strand at 508.979 kb on + strand at 508.979 kb on + strand at 508.979 kb on + strand at 509.098 kb on - strand at 509.187 kb on - strand at 509.395 kb on + strand, within DvMF_0434 at 509.596 kb on - strand, within DvMF_0434 at 509.689 kb on + strand, within DvMF_0434 at 509.973 kb on - strand, within DvMF_0434 at 510.480 kb on + strand, within DvMF_0435 at 510.820 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 508,932 + -0.3 508,938 - -0.5 508,979 + -0.4 508,979 + -0.5 508,979 + -0.7 509,098 - -1.0 509,187 - +0.0 509,395 + DvMF_0434 0.17 -3.0 509,596 - DvMF_0434 0.42 -4.9 509,689 + DvMF_0434 0.53 -4.9 509,973 - DvMF_0434 0.88 -2.8 510,480 + DvMF_0435 0.31 -0.2 510,820 - -0.4
Or see this region's nucleotide sequence