Strain Fitness in Shewanella amazonensis SB2B around Sama_3395

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,022,102	+		Sama_3394	0.25	+0.8
4,022,118	+		Sama_3394	0.26	-1.9
4,022,163	+		Sama_3394	0.30	-0.7
4,022,163	+		Sama_3394	0.30	+1.4
4,022,163	+		Sama_3394	0.30	-2.0
4,022,172	+		Sama_3394	0.31	-2.5
4,022,172	+		Sama_3394	0.31	-0.5
4,022,172	+		Sama_3394	0.31	+2.3
4,022,172	+		Sama_3394	0.31	-1.1
4,022,173	-		Sama_3394	0.31	-1.3
4,022,173	-		Sama_3394	0.31	-0.7
4,022,197	+		Sama_3394	0.33	-2.4
4,022,197	+		Sama_3394	0.33	-1.4
4,022,197	+		Sama_3394	0.33	+0.6
4,022,197	+		Sama_3394	0.33	+0.9
4,022,197	+		Sama_3394	0.33	+0.0
4,022,197	+		Sama_3394	0.33	+3.0
4,022,197	+		Sama_3394	0.33	-1.2
4,022,197	+		Sama_3394	0.33	+2.4
4,022,197	+		Sama_3394	0.33	+0.3
4,022,197	+		Sama_3394	0.33	-2.1
4,022,197	+		Sama_3394	0.33	+0.5
4,022,197	+		Sama_3394	0.33	+1.6
4,022,197	+		Sama_3394	0.33	-1.9
4,022,197	+		Sama_3394	0.33	-2.8
4,022,198	-		Sama_3394	0.33	-0.3
4,022,198	-		Sama_3394	0.33	-1.5
4,022,198	-		Sama_3394	0.33	+1.0
4,022,198	-		Sama_3394	0.33	+0.7
4,022,198	-		Sama_3394	0.33	+1.3
4,022,199	+		Sama_3394	0.33	-1.7
4,022,200	-		Sama_3394	0.33	+0.2
4,022,234	+		Sama_3394	0.36	+0.3
4,022,234	+		Sama_3394	0.36	-0.9
4,022,234	+		Sama_3394	0.36	+0.0
4,022,235	-		Sama_3394	0.36	-1.4
4,022,235	-		Sama_3394	0.36	+0.6
4,022,235	-		Sama_3394	0.36	-1.9
4,022,235	-		Sama_3394	0.36	-1.0
4,022,235	-		Sama_3394	0.36	+1.6
4,022,235	-		Sama_3394	0.36	+0.1
4,022,242	+		Sama_3394	0.36	-1.7
4,022,242	+		Sama_3394	0.36	+0.0
4,022,242	+		Sama_3394	0.36	+2.4
4,022,242	+		Sama_3394	0.36	-2.9
4,022,243	-		Sama_3394	0.37	-1.0
4,022,243	-		Sama_3394	0.37	+0.3
4,022,243	-		Sama_3394	0.37	-2.3
4,022,243	-		Sama_3394	0.37	+1.4
4,022,243	-		Sama_3394	0.37	+1.6
4,022,243	-		Sama_3394	0.37	+1.8
4,022,268	+		Sama_3394	0.39	-0.4
4,022,268	+		Sama_3394	0.39	-1.7
4,022,269	-		Sama_3394	0.39	-1.9
4,022,306	+		Sama_3394	0.42	-3.1
4,022,306	+		Sama_3394	0.42	+0.4
4,022,306	+		Sama_3394	0.42	+0.4
4,022,306	+		Sama_3394	0.42	-1.3
4,022,306	+		Sama_3394	0.42	+0.4
4,022,307	-		Sama_3394	0.42	+0.6
4,022,307	-		Sama_3394	0.42	-2.3
4,022,307	-		Sama_3394	0.42	-1.4
4,022,307	-		Sama_3394	0.42	-1.3
4,022,312	-		Sama_3394	0.42	+0.7
4,022,312	-		Sama_3394	0.42	+3.0
4,022,312	-		Sama_3394	0.42	-1.2
4,022,312	-		Sama_3394	0.42	-0.2
4,022,317	+		Sama_3394	0.43	+0.6
4,022,317	+		Sama_3394	0.43	+0.9
4,022,317	+		Sama_3394	0.43	+0.7
4,022,317	+		Sama_3394	0.43	+0.3
4,022,318	-		Sama_3394	0.43	+1.6
4,022,332	+		Sama_3394	0.44	+1.0
4,022,332	+		Sama_3394	0.44	+0.1
4,022,332	+		Sama_3394	0.44	+0.8
4,022,332	+		Sama_3394	0.44	-1.4
4,022,332	+		Sama_3394	0.44	+0.0
4,022,332	+		Sama_3394	0.44	-1.2
4,022,333	-		Sama_3394	0.44	+0.2
4,022,333	-		Sama_3394	0.44	-0.7
4,022,333	-		Sama_3394	0.44	+1.7
4,022,333	-		Sama_3394	0.44	-0.6
4,022,333	-		Sama_3394	0.44	-1.9
4,022,338	-		Sama_3394	0.44	-2.0
4,022,431	+		Sama_3394	0.52	+1.9
4,022,433	+		Sama_3394	0.52	+0.4
4,022,433	+		Sama_3394	0.52	+1.5
4,022,434	-		Sama_3394	0.52	+0.3
4,022,486	+		Sama_3394	0.56	-1.2
4,022,486	+		Sama_3394	0.56	-1.6
4,022,487	-		Sama_3394	0.56	-1.6
4,022,502	+		Sama_3394	0.58	+0.0
4,022,502	+		Sama_3394	0.58	-1.2
4,022,503	-		Sama_3394	0.58	+0.9
4,022,503	-		Sama_3394	0.58	+0.6
4,022,503	-		Sama_3394	0.58	-0.3
4,022,550	+		Sama_3394	0.61	-0.6
4,022,550	+		Sama_3394	0.61	+0.0
4,022,550	+		Sama_3394	0.61	-1.2
4,022,550	+		Sama_3394	0.61	-2.4
4,022,551	-		Sama_3394	0.62	-1.5
4,022,551	-		Sama_3394	0.62	+0.2
4,022,551	-		Sama_3394	0.62	-0.1
4,022,551	-		Sama_3394	0.62	+0.6
4,022,554	+		Sama_3394	0.62	+0.8
4,022,554	+		Sama_3394	0.62	-0.1
4,022,555	-		Sama_3394	0.62	+0.5
4,022,555	-		Sama_3394	0.62	+2.6
4,022,555	-		Sama_3394	0.62	-0.7
4,022,578	-		Sama_3394	0.64	+0.3
4,022,615	+		Sama_3394	0.67	+0.9
4,022,615	+		Sama_3394	0.67	+1.0
4,022,616	-		Sama_3394	0.67	-2.1
4,022,616	-		Sama_3394	0.67	+0.2
4,022,616	-		Sama_3394	0.67	+0.3
4,022,616	-		Sama_3394	0.67	+0.6
4,022,616	-		Sama_3394	0.67	+0.6
4,022,616	-		Sama_3394	0.67	-1.2
4,022,616	-		Sama_3394	0.67	-3.0
4,022,684	-		Sama_3394	0.72	-1.6
4,022,684	-		Sama_3394	0.72	-2.3
4,022,763	+		Sama_3394	0.79	-2.5
4,022,763	+		Sama_3394	0.79	-1.2
4,022,763	+		Sama_3394	0.79	+0.3
4,022,764	-		Sama_3394	0.79	+0.8
4,022,764	-		Sama_3394	0.79	+0.6
4,022,788	+		Sama_3394	0.81	-1.9
4,022,788	+		Sama_3394	0.81	+0.7
4,022,788	+		Sama_3394	0.81	+0.9
4,022,788	+		Sama_3394	0.81	-0.7
4,022,788	+		Sama_3394	0.81	-1.6
4,022,789	-		Sama_3394	0.81	-1.1
4,022,789	-		Sama_3394	0.81	-1.4
4,022,790	+		Sama_3394	0.81	-0.3
4,022,791	-		Sama_3394	0.81	-1.5
4,022,791	-		Sama_3394	0.81	-1.9
4,022,918	-				-0.7
4,022,918	-				-2.1
4,022,918	-				-0.4
4,022,919	+				-3.4
4,022,920	-				-0.4
4,022,953	+				+0.0
4,022,954	-				-1.0
4,022,954	-				+1.1
4,022,954	-				+0.1
4,022,967	+				-0.4
4,022,967	+				+0.0
4,022,967	+				+0.0
4,022,968	-				-2.9
4,022,968	-				+1.3
4,022,968	-				-0.6
4,023,022	+				+2.4
4,023,022	+				+0.4
4,023,023	-				-1.7
4,023,023	-				+0.2
4,023,081	+				-1.3
4,023,081	+				+2.6
4,023,081	+				+0.7
4,023,081	+				-1.4
4,023,082	-				-0.5
4,023,082	-				+0.0
4,023,082	-				+2.4
4,023,082	-				+0.3
4,023,084	+				-2.2
4,023,085	-				-0.2
4,023,128	+				+1.0
4,023,128	+				-2.9
4,023,129	-				-2.5
4,023,129	-				-1.5
4,023,129	-				-2.1
4,023,129	-				+1.0
4,023,143	+		Sama_3395	0.11	-0.5
4,023,143	+		Sama_3395	0.11	-1.9
4,023,144	-		Sama_3395	0.11	+0.0
4,023,144	-		Sama_3395	0.11	-0.9
4,023,144	-		Sama_3395	0.11	+1.0
4,023,166	+		Sama_3395	0.14	-0.1
4,023,167	-		Sama_3395	0.15	-2.1
4,023,167	-		Sama_3395	0.15	-1.3
4,023,174	+		Sama_3395	0.16	+1.1
4,023,174	+		Sama_3395	0.16	-2.1
4,023,272	+		Sama_3395	0.29	+3.0
4,023,272	+		Sama_3395	0.29	-1.7
4,023,329	+		Sama_3395	0.36	+1.4
4,023,347	+		Sama_3395	0.39	+1.0
4,023,347	+		Sama_3395	0.39	-1.7
4,023,347	+		Sama_3395	0.39	-1.0
4,023,348	-		Sama_3395	0.39	-1.1
4,023,362	-		Sama_3395	0.41	+2.3
4,023,368	-		Sama_3395	0.42	-0.3
4,023,404	+		Sama_3395	0.47	-3.0
4,023,429	+		Sama_3395	0.50	-0.2
4,023,429	+		Sama_3395	0.50	-0.7
4,023,429	+		Sama_3395	0.50	-1.4
4,023,505	+		Sama_3395	0.60	+0.6
4,023,505	+		Sama_3395	0.60	-0.4
4,023,505	+		Sama_3395	0.60	+0.2
4,023,505	+		Sama_3395	0.60	-0.7
4,023,505	+		Sama_3395	0.60	-0.6
4,023,506	-		Sama_3395	0.60	-1.7
4,023,506	-		Sama_3395	0.60	-1.0
4,023,506	-		Sama_3395	0.60	-3.6
4,023,506	-		Sama_3395	0.60	-1.9
4,023,506	-		Sama_3395	0.60	+2.6
4,023,506	-		Sama_3395	0.60	+2.8
4,023,538	-		Sama_3395	0.65	+2.0
4,023,538	-		Sama_3395	0.65	+0.4
4,023,563	+		Sama_3395	0.68	+0.4
4,023,563	+		Sama_3395	0.68	+2.3
4,023,563	+		Sama_3395	0.68	+1.7
4,023,563	+		Sama_3395	0.68	-0.2
4,023,563	+		Sama_3395	0.68	-1.2
4,023,563	+		Sama_3395	0.68	+0.8
4,023,563	+		Sama_3395	0.68	-0.1
4,023,564	-		Sama_3395	0.68	-0.1
4,023,564	-		Sama_3395	0.68	-0.4
4,023,564	-		Sama_3395	0.68	-0.8
4,023,564	-		Sama_3395	0.68	+0.0
4,023,564	-		Sama_3395	0.68	-1.7
4,023,564	-		Sama_3395	0.68	+0.6
4,023,564	-		Sama_3395	0.68	-2.0
4,023,564	-		Sama_3395	0.68	+0.5
4,023,564	-		Sama_3395	0.68	+0.1
4,023,607	+		Sama_3395	0.74	-0.9
4,023,607	+		Sama_3395	0.74	-1.4
4,023,607	+		Sama_3395	0.74	-0.6
4,023,608	-		Sama_3395	0.74	+0.4
4,023,608	-		Sama_3395	0.74	-1.3
4,023,666	+		Sama_3395	0.82	-2.1
4,023,666	+		Sama_3395	0.82	-1.3
4,023,666	+		Sama_3395	0.82	+1.1
4,023,666	+		Sama_3395	0.82	-1.9
4,023,666	+		Sama_3395	0.82	-2.0
4,023,666	+		Sama_3395	0.82	-2.1
4,023,666	+		Sama_3395	0.82	-2.8
4,023,666	+		Sama_3395	0.82	-1.9
4,023,666	+		Sama_3395	0.82	-2.2
4,023,666	+		Sama_3395	0.82	+1.3
4,023,666	+		Sama_3395	0.82	-1.4
4,023,666	+		Sama_3395	0.82	+1.0
4,023,666	+		Sama_3395	0.82	-1.7
4,023,666	+		Sama_3395	0.82	-1.7
4,023,666	+		Sama_3395	0.82	-1.1
4,023,666	+		Sama_3395	0.82	+1.9
4,023,666	+		Sama_3395	0.82	+0.8
4,023,666	+		Sama_3395	0.82	+2.0
4,023,666	+		Sama_3395	0.82	+2.6
4,023,666	+		Sama_3395	0.82	-2.1
4,023,666	+		Sama_3395	0.82	+0.8
4,023,666	+		Sama_3395	0.82	-1.0
4,023,666	+		Sama_3395	0.82	+1.6
4,023,666	+		Sama_3395	0.82	-0.0
4,023,667	-		Sama_3395	0.82	-1.7
4,023,667	-		Sama_3395	0.82	-0.3
4,023,667	-		Sama_3395	0.82	-1.7
4,023,667	-		Sama_3395	0.82	-0.3
4,023,667	-		Sama_3395	0.82	-1.2
4,023,667	-		Sama_3395	0.82	+0.1
4,023,667	-		Sama_3395	0.82	+0.8
4,023,667	-		Sama_3395	0.82	+2.0
4,023,667	-		Sama_3395	0.82	-2.2
4,023,667	-		Sama_3395	0.82	-0.2
4,023,667	-		Sama_3395	0.82	-1.4
4,023,667	-		Sama_3395	0.82	+0.4
4,023,667	-		Sama_3395	0.82	+0.1
4,023,667	-		Sama_3395	0.82	+1.8
4,023,668	+		Sama_3395	0.82	-2.0
4,023,668	+		Sama_3395	0.82	-0.3
4,023,668	+		Sama_3395	0.82	-0.9
4,023,668	+		Sama_3395	0.82	+0.1
4,023,668	+		Sama_3395	0.82	-2.0
4,023,668	+		Sama_3395	0.82	+1.8
4,023,669	-		Sama_3395	0.82	-1.6
4,023,669	-		Sama_3395	0.82	-0.3
4,023,669	-		Sama_3395	0.82	+0.2
4,023,669	-		Sama_3395	0.82	+0.6
4,023,669	-		Sama_3395	0.82	+0.3
4,023,669	-		Sama_3395	0.82	+0.3
4,023,669	-		Sama_3395	0.82	+2.0
4,023,669	-		Sama_3395	0.82	-2.0
4,023,677	+		Sama_3395	0.83	-1.7
4,023,677	+		Sama_3395	0.83	-0.4
4,023,677	+		Sama_3395	0.83	+0.6
4,023,677	+		Sama_3395	0.83	-0.4
4,023,678	-		Sama_3395	0.84	+0.4
4,023,714	-		Sama_3395	0.88	-0.6
4,023,791	+				+0.2
4,023,791	+				+0.8
4,023,791	+				-0.6
4,023,792	-				-0.4
4,023,792	-				+0.1
4,023,794	+				-2.3
4,023,794	+				-3.6
4,023,794	+				+0.6
4,023,794	+				-0.8
4,023,794	+				+0.8
4,023,840	+				+2.9
4,023,842	+				-1.0
4,023,843	-				-1.5
4,023,843	-				-1.7
4,023,843	-				-3.3
4,023,893	-				-1.2
4,023,893	-				+1.7
4,023,952	+		Sama_3396	0.13	-1.7
4,023,952	+		Sama_3396	0.13	+0.8
4,023,954	+		Sama_3396	0.13	-0.6
4,023,971	+		Sama_3396	0.15	-0.4
4,023,971	+		Sama_3396	0.15	+0.4
4,023,971	+		Sama_3396	0.15	-0.7
4,023,971	+		Sama_3396	0.15	+0.6
4,023,972	-		Sama_3396	0.15	+1.9
4,023,972	-		Sama_3396	0.15	-2.5
4,024,034	+		Sama_3396	0.20	-0.3
4,024,035	-		Sama_3396	0.20	-0.3
4,024,065	+		Sama_3396	0.23	-1.9
4,024,065	+		Sama_3396	0.23	+0.8
4,024,066	-		Sama_3396	0.23	+0.4
4,024,087	+		Sama_3396	0.25	+0.6
4,024,087	+		Sama_3396	0.25	+2.3
4,024,088	-		Sama_3396	0.25	-1.0
4,024,088	-		Sama_3396	0.25	+0.8
4,024,121	+		Sama_3396	0.28	-0.0
4,024,121	+		Sama_3396	0.28	-1.4
4,024,121	+		Sama_3396	0.28	+2.3
4,024,121	+		Sama_3396	0.28	-1.6
4,024,122	-		Sama_3396	0.28	-0.1
4,024,122	-		Sama_3396	0.28	+2.1
4,024,122	-		Sama_3396	0.28	-1.9
4,024,169	+		Sama_3396	0.32	-2.7
4,024,170	-		Sama_3396	0.32	-2.0
4,024,170	-		Sama_3396	0.32	+0.2
4,024,170	-		Sama_3396	0.32	-2.3
4,024,220	-		Sama_3396	0.37	+0.6
4,024,226	+		Sama_3396	0.37	+0.6
4,024,226	+		Sama_3396	0.37	+1.9
4,024,226	+		Sama_3396	0.37	-1.7
4,024,226	+		Sama_3396	0.37	+0.7
4,024,227	-		Sama_3396	0.37	-0.7
4,024,282	+		Sama_3396	0.42	-1.0
4,024,282	+		Sama_3396	0.42	+2.3
4,024,282	+		Sama_3396	0.42	+2.6
4,024,282	+		Sama_3396	0.42	+0.8
4,024,282	+		Sama_3396	0.42	-0.2
4,024,283	-		Sama_3396	0.42	-2.9
4,024,283	-		Sama_3396	0.42	-3.5
4,024,283	-		Sama_3396	0.42	-2.7
4,024,283	-		Sama_3396	0.42	-1.6
4,024,324	+		Sama_3396	0.46	-0.1
4,024,324	+		Sama_3396	0.46	-0.3
4,024,324	+		Sama_3396	0.46	-0.5
4,024,324	+		Sama_3396	0.46	+0.4
4,024,325	-		Sama_3396	0.46	-1.4
4,024,347	+		Sama_3396	0.48	-0.4
4,024,348	-		Sama_3396	0.48	+3.1
4,024,348	-		Sama_3396	0.48	-2.5
4,024,348	-		Sama_3396	0.48	-0.4
4,024,365	-		Sama_3396	0.49	-0.0
4,024,391	+		Sama_3396	0.52	-0.2
4,024,391	+		Sama_3396	0.52	+0.8
4,024,391	+		Sama_3396	0.52	-2.5
4,024,391	+		Sama_3396	0.52	-0.4
4,024,392	-		Sama_3396	0.52	+1.0
4,024,435	+		Sama_3396	0.56	+1.2
4,024,435	+		Sama_3396	0.56	+1.9
4,024,436	-		Sama_3396	0.56	+4.7
4,024,436	-		Sama_3396	0.56	-0.4
4,024,468	+		Sama_3396	0.59	+2.8
4,024,468	+		Sama_3396	0.59	+0.7
4,024,468	+		Sama_3396	0.59	+0.7
4,024,468	+		Sama_3396	0.59	-1.6
4,024,469	-		Sama_3396	0.59	-2.0
4,024,469	-		Sama_3396	0.59	-1.4
4,024,485	+		Sama_3396	0.60	-2.6
4,024,485	+		Sama_3396	0.60	+0.1
4,024,485	+		Sama_3396	0.60	-1.1
4,024,485	+		Sama_3396	0.60	-1.0
4,024,485	+		Sama_3396	0.60	-2.3
4,024,485	+		Sama_3396	0.60	-1.2
4,024,486	-		Sama_3396	0.60	-0.2
4,024,486	-		Sama_3396	0.60	+1.0
4,024,486	-		Sama_3396	0.60	+1.1
4,024,486	-		Sama_3396	0.60	+0.6
4,024,486	-		Sama_3396	0.60	+1.4
4,024,487	+		Sama_3396	0.60	-1.3
4,024,487	+		Sama_3396	0.60	+2.1
4,024,487	+		Sama_3396	0.60	+1.6
4,024,487	+		Sama_3396	0.60	+1.6
4,024,487	+		Sama_3396	0.60	-0.5
4,024,487	+		Sama_3396	0.60	+0.6
4,024,487	+		Sama_3396	0.60	-2.0
4,024,487	+		Sama_3396	0.60	+0.8
4,024,487	+		Sama_3396	0.60	+0.9
4,024,487	+		Sama_3396	0.60	+1.9
4,024,488	-		Sama_3396	0.60	-2.4
4,024,488	-		Sama_3396	0.60	-3.0
4,024,488	-		Sama_3396	0.60	-3.0
4,024,488	-		Sama_3396	0.60	+0.6
4,024,488	-		Sama_3396	0.60	-2.1
4,024,488	-		Sama_3396	0.60	+0.2
4,024,488	-		Sama_3396	0.60	-1.0
4,024,488	-		Sama_3396	0.60	+1.2
4,024,489	-		Sama_3396	0.60	+4.5
4,024,559	-		Sama_3396	0.67	-0.7
4,024,575	+		Sama_3396	0.68	-1.4
4,024,575	+		Sama_3396	0.68	+0.8
4,024,576	-		Sama_3396	0.68	-1.1
4,024,576	-		Sama_3396	0.68	-1.4
4,024,576	-		Sama_3396	0.68	+1.4
4,024,588	+		Sama_3396	0.69	+1.4
4,024,589	-		Sama_3396	0.69	+2.2
4,024,602	+		Sama_3396	0.70	-1.0
4,024,603	-		Sama_3396	0.70	+3.1
4,024,616	+		Sama_3396	0.72	-0.6
4,024,616	+		Sama_3396	0.72	+0.2
4,024,646	+		Sama_3396	0.74	+1.9
4,024,647	-		Sama_3396	0.74	+1.6
4,024,660	+		Sama_3396	0.76	-1.0
4,024,660	+		Sama_3396	0.76	+1.0
4,024,660	+		Sama_3396	0.76	-0.7
4,024,661	-		Sama_3396	0.76	-2.2
4,024,704	-		Sama_3396	0.79	-0.0
4,024,729	-		Sama_3396	0.82	-1.3
4,024,729	-		Sama_3396	0.82	-0.7
4,024,729	-		Sama_3396	0.82	-1.9
4,024,729	-		Sama_3396	0.82	+0.2
4,024,762	+		Sama_3396	0.85	-0.7
4,024,762	+		Sama_3396	0.85	-2.2
4,024,763	-		Sama_3396	0.85	+2.0
4,024,771	+		Sama_3396	0.85	+0.9
4,024,771	+		Sama_3396	0.85	+0.6
4,024,772	-		Sama_3396	0.85	-0.9