Strain Fitness in Shewanella amazonensis SB2B around Sama_2630

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,148,648	+				+0.6
3,148,648	+				+1.8
3,148,649	-				+1.9
3,148,649	-				+1.5
3,148,649	-				-1.1
3,148,659	+				+0.5
3,148,659	+				+0.3
3,148,660	-				-1.9
3,148,660	-				-0.7
3,148,662	-				-1.4
3,148,662	-				-1.3
3,148,662	-				-0.7
3,148,662	-				-0.1
3,148,689	-				-0.7
3,148,691	-				-1.6
3,148,739	+				+2.5
3,148,839	+		Sama_2629	0.14	-0.3
3,148,840	-		Sama_2629	0.14	+3.2
3,148,912	-		Sama_2629	0.24	+4.7
3,148,912	-		Sama_2629	0.24	+4.6
3,148,912	-		Sama_2629	0.24	+2.6
3,148,915	+		Sama_2629	0.24	+0.3
3,148,915	+		Sama_2629	0.24	+4.2
3,148,915	+		Sama_2629	0.24	-0.7
3,148,916	-		Sama_2629	0.24	+3.0
3,148,916	-		Sama_2629	0.24	+3.7
3,148,916	-		Sama_2629	0.24	+3.0
3,148,916	-		Sama_2629	0.24	+4.2
3,148,971	-		Sama_2629	0.32	+3.8
3,149,067	+		Sama_2629	0.45	+2.8
3,149,122	+		Sama_2629	0.53	+3.9
3,149,172	-		Sama_2629	0.60	+3.6
3,149,186	+		Sama_2629	0.61	+4.5
3,149,186	+		Sama_2629	0.61	+3.4
3,149,192	+		Sama_2629	0.62	+4.1
3,149,193	-		Sama_2629	0.62	+4.7
3,149,245	-		Sama_2629	0.70	+4.8
3,149,250	+		Sama_2629	0.70	+3.7
3,149,251	-		Sama_2629	0.70	+3.3
3,149,290	+		Sama_2629	0.76	-1.7
3,149,290	+		Sama_2629	0.76	+2.8
3,149,290	+		Sama_2629	0.76	+3.3
3,149,290	+		Sama_2629	0.76	+5.4
3,149,290	+		Sama_2629	0.76	+3.0
3,149,291	-		Sama_2629	0.76	+3.2
3,149,291	-		Sama_2629	0.76	+1.8
3,149,291	-		Sama_2629	0.76	+5.0
3,149,291	-		Sama_2629	0.76	+5.3
3,149,326	-		Sama_2629	0.81	+3.5
3,149,326	-		Sama_2629	0.81	+2.0
3,149,337	+		Sama_2629	0.82	-1.1
3,149,337	+		Sama_2629	0.82	+1.6
3,149,338	-		Sama_2629	0.82	+3.7
3,149,399	-				+4.6
3,149,401	+				+0.5
3,149,402	-				+3.5
3,149,402	-				+2.9
3,149,402	-				+1.3
3,149,473	-				+3.4
3,149,478	-				+1.6
3,149,520	-				+2.6
3,149,525	+				+4.1
3,149,544	-				+3.0
3,149,544	-				+2.8
3,149,544	-				+2.3
3,149,626	+				-1.8
3,149,626	+				-2.6
3,149,626	+				+0.3
3,149,627	-				-1.1
3,149,681	-				+0.9
3,149,694	+		Sama_2630	0.12	+0.7
3,149,694	+		Sama_2630	0.12	+0.4
3,149,748	-		Sama_2630	0.21	+2.3
3,149,791	+		Sama_2630	0.28	-1.9
3,149,791	+		Sama_2630	0.28	-0.3
3,149,791	+		Sama_2630	0.28	-1.9
3,149,791	+		Sama_2630	0.28	-0.3
3,149,792	-		Sama_2630	0.28	-1.7
3,149,792	-		Sama_2630	0.28	-1.9
3,149,792	-		Sama_2630	0.28	-3.8
3,149,792	-		Sama_2630	0.28	-1.5
3,149,799	+		Sama_2630	0.29	+1.5
3,149,800	-		Sama_2630	0.29	-2.3
3,149,808	+		Sama_2630	0.31	-2.7
3,149,830	-		Sama_2630	0.34	-2.7
3,149,873	+		Sama_2630	0.42	-1.5
3,149,874	-		Sama_2630	0.42	-2.5
3,149,879	+		Sama_2630	0.43	-0.7
3,149,879	+		Sama_2630	0.43	-1.3
3,149,880	-		Sama_2630	0.43	-0.7
3,149,880	-		Sama_2630	0.43	-2.8
3,149,880	-		Sama_2630	0.43	-0.3
3,149,880	-		Sama_2630	0.43	-0.3
3,149,880	-		Sama_2630	0.43	-2.6
3,149,897	+		Sama_2630	0.46	-1.1
3,149,898	-		Sama_2630	0.46	-1.3
3,149,909	+		Sama_2630	0.48	+3.3
3,149,928	-		Sama_2630	0.51	-2.3
3,149,928	-		Sama_2630	0.51	+1.3
3,149,928	-		Sama_2630	0.51	-2.8
3,149,928	-		Sama_2630	0.51	-1.3
3,149,930	-		Sama_2630	0.51	-2.5
3,149,951	+		Sama_2630	0.55	-0.7
3,149,951	+		Sama_2630	0.55	-1.1
3,149,952	-		Sama_2630	0.55	-2.2
3,149,952	-		Sama_2630	0.55	-0.3
3,150,036	-		Sama_2630	0.69	-2.8
3,150,036	-		Sama_2630	0.69	+0.8
3,150,077	-		Sama_2630	0.76	+0.5
3,150,111	+		Sama_2630	0.81	-2.1
3,150,112	-		Sama_2630	0.82	-1.9
3,150,112	-		Sama_2630	0.82	-1.9
3,150,216	-				-2.2
3,150,216	-				-2.7
3,150,238	+				-1.3
3,150,239	-				+0.7
3,150,302	+				-1.1
3,150,303	-				-0.7
3,150,303	-				+0.9
3,150,303	-				+1.5
3,150,303	-				+1.3
3,150,309	-				-1.1
3,150,309	-				-2.5
3,150,354	-				+1.7
3,150,356	+				-1.1
3,150,356	+				+1.0
3,150,357	-				+0.3
3,150,377	+				+1.3
3,150,377	+				-0.7
3,150,378	-				-0.7
3,150,378	-				-2.8
3,150,396	-				-0.3
3,150,501	+		Sama_2631	0.10	-0.7
3,150,550	+		Sama_2631	0.13	-2.1
3,150,550	+		Sama_2631	0.13	+0.1
3,150,550	+		Sama_2631	0.13	-1.1
3,150,550	+		Sama_2631	0.13	-0.5
3,150,550	+		Sama_2631	0.13	+3.7
3,150,551	-		Sama_2631	0.13	-2.3
3,150,551	-		Sama_2631	0.13	+0.3
3,150,551	-		Sama_2631	0.13	+0.3
3,150,551	-		Sama_2631	0.13	-1.3
3,150,551	-		Sama_2631	0.13	-1.3
3,150,551	-		Sama_2631	0.13	+0.3
3,150,551	-		Sama_2631	0.13	+3.1
3,150,551	-		Sama_2631	0.13	+1.5
3,150,554	+		Sama_2631	0.13	-0.7
3,150,554	+		Sama_2631	0.13	-2.1
3,150,555	-		Sama_2631	0.13	+0.8
3,150,555	-		Sama_2631	0.13	+0.1
3,150,555	-		Sama_2631	0.13	-3.0
3,150,555	-		Sama_2631	0.13	+0.9
3,150,567	-		Sama_2631	0.14	-2.7
3,150,567	-		Sama_2631	0.14	-0.7
3,150,590	+		Sama_2631	0.15	-2.1
3,150,590	+		Sama_2631	0.15	-1.3
3,150,590	+		Sama_2631	0.15	-0.3
3,150,590	+		Sama_2631	0.15	+0.4
3,150,590	+		Sama_2631	0.15	-1.2
3,150,590	+		Sama_2631	0.15	+0.7
3,150,590	+		Sama_2631	0.15	+1.7
3,150,590	+		Sama_2631	0.15	-2.3
3,150,590	+		Sama_2631	0.15	-3.3
3,150,590	+		Sama_2631	0.15	-1.9
3,150,590	+		Sama_2631	0.15	-1.6
3,150,590	+		Sama_2631	0.15	-1.3
3,150,591	-		Sama_2631	0.15	+0.6
3,150,591	-		Sama_2631	0.15	-0.1
3,150,591	-		Sama_2631	0.15	+1.3
3,150,591	-		Sama_2631	0.15	+2.7
3,150,591	-		Sama_2631	0.15	-1.5
3,150,591	-		Sama_2631	0.15	+2.6
3,150,591	-		Sama_2631	0.15	+1.3
3,150,591	-		Sama_2631	0.15	-0.7
3,150,591	-		Sama_2631	0.15	-2.5
3,150,591	-		Sama_2631	0.15	-1.5
3,150,591	-		Sama_2631	0.15	+0.2
3,150,591	-		Sama_2631	0.15	+0.3
3,150,591	-		Sama_2631	0.15	-0.3
3,150,591	-		Sama_2631	0.15	-1.0
3,150,591	-		Sama_2631	0.15	-0.5
3,150,591	-		Sama_2631	0.15	-1.1
3,150,591	-		Sama_2631	0.15	-0.3
3,150,591	-		Sama_2631	0.15	-0.9
3,150,591	-		Sama_2631	0.15	-0.1
3,150,591	-		Sama_2631	0.15	-2.4
3,150,591	-		Sama_2631	0.15	-2.2
3,150,591	-		Sama_2631	0.15	-3.4
3,150,591	-		Sama_2631	0.15	-2.9
3,150,591	-		Sama_2631	0.15	+0.0
3,150,591	-		Sama_2631	0.15	-1.3
3,150,591	-		Sama_2631	0.15	-1.9
3,150,591	-		Sama_2631	0.15	-2.6
3,150,591	-		Sama_2631	0.15	-2.6
3,150,591	-		Sama_2631	0.15	-3.4
3,150,591	-		Sama_2631	0.15	-1.9
3,150,591	-		Sama_2631	0.15	+0.6
3,150,594	+		Sama_2631	0.15	-1.7
3,150,594	+		Sama_2631	0.15	-0.5
3,150,594	+		Sama_2631	0.15	-3.5
3,150,594	+		Sama_2631	0.15	-0.7
3,150,594	+		Sama_2631	0.15	+1.3
3,150,594	+		Sama_2631	0.15	-1.3
3,150,594	+		Sama_2631	0.15	-0.2
3,150,595	-		Sama_2631	0.15	-2.8
3,150,595	-		Sama_2631	0.15	-1.5
3,150,595	-		Sama_2631	0.15	+0.3
3,150,595	-		Sama_2631	0.15	+0.4
3,150,595	-		Sama_2631	0.15	+1.8
3,150,595	-		Sama_2631	0.15	+1.5
3,150,595	-		Sama_2631	0.15	-2.5
3,150,595	-		Sama_2631	0.15	-1.3
3,150,595	-		Sama_2631	0.15	-1.5
3,150,652	-		Sama_2631	0.18	-1.3
3,150,675	-		Sama_2631	0.19	-1.1
3,150,675	-		Sama_2631	0.19	-1.5
3,150,679	+		Sama_2631	0.19	+0.3
3,150,679	+		Sama_2631	0.19	+0.3
3,150,679	+		Sama_2631	0.19	+0.6
3,150,679	+		Sama_2631	0.19	+0.3
3,150,680	-		Sama_2631	0.19	+0.5
3,150,680	-		Sama_2631	0.19	-2.2
3,150,680	-		Sama_2631	0.19	-0.7
3,150,680	-		Sama_2631	0.19	-2.8
3,150,680	-		Sama_2631	0.19	-1.5
3,150,680	-		Sama_2631	0.19	+1.3
3,150,776	+		Sama_2631	0.24	-0.9
3,150,776	+		Sama_2631	0.24	-1.7
3,150,777	-		Sama_2631	0.24	-0.6
3,150,777	-		Sama_2631	0.24	-3.3
3,150,777	-		Sama_2631	0.24	+1.3
3,150,833	-		Sama_2631	0.27	+1.8
3,150,876	-		Sama_2631	0.29	-1.7
3,150,894	-		Sama_2631	0.30	+0.3
3,150,894	-		Sama_2631	0.30	-0.3
3,150,894	-		Sama_2631	0.30	-2.1
3,150,894	-		Sama_2631	0.30	+0.5
3,150,935	+		Sama_2631	0.33	-0.0
3,150,936	-		Sama_2631	0.33	-1.7
3,150,936	-		Sama_2631	0.33	+0.7
3,150,936	-		Sama_2631	0.33	-0.3
3,150,936	-		Sama_2631	0.33	+0.1
3,150,949	+		Sama_2631	0.33	-3.2
3,150,949	+		Sama_2631	0.33	-1.9
3,150,950	-		Sama_2631	0.33	-2.4
3,150,950	-		Sama_2631	0.33	-1.7
3,150,950	-		Sama_2631	0.33	-0.5
3,150,950	-		Sama_2631	0.33	+0.3
3,150,950	+		Sama_2631	0.33	+0.9
3,150,950	-		Sama_2631	0.33	-2.2
3,150,950	-		Sama_2631	0.33	-3.1
3,150,950	-		Sama_2631	0.33	-1.1
3,150,969	+		Sama_2631	0.34	-1.1
3,150,969	+		Sama_2631	0.34	-1.9
3,150,986	+		Sama_2631	0.35	-2.3
3,151,075	-		Sama_2631	0.40	-1.3
3,151,109	+		Sama_2631	0.41	-0.3
3,151,110	-		Sama_2631	0.42	-2.1
3,151,127	+		Sama_2631	0.42	-0.2
3,151,127	+		Sama_2631	0.42	-1.1
3,151,128	-		Sama_2631	0.42	-1.1
3,151,128	-		Sama_2631	0.42	+1.3
3,151,128	-		Sama_2631	0.42	+0.5
3,151,128	-		Sama_2631	0.42	-0.5
3,151,128	-		Sama_2631	0.42	+2.3
3,151,128	-		Sama_2631	0.42	+0.7
3,151,151	-		Sama_2631	0.44	-0.6
3,151,203	+		Sama_2631	0.46	+0.4
3,151,203	+		Sama_2631	0.46	+0.9
3,151,203	+		Sama_2631	0.46	-1.7
3,151,204	-		Sama_2631	0.46	+1.4
3,151,204	-		Sama_2631	0.46	-2.0
3,151,204	-		Sama_2631	0.46	-1.1
3,151,205	+		Sama_2631	0.46	-1.3
3,151,205	+		Sama_2631	0.46	+0.3
3,151,205	+		Sama_2631	0.46	-1.7
3,151,206	-		Sama_2631	0.46	+0.3
3,151,206	-		Sama_2631	0.46	+0.9
3,151,206	-		Sama_2631	0.46	+0.1