Strain Fitness in Shewanella amazonensis SB2B around Sama_0932

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,125,948	+		Sama_0931	0.73	-0.3
1,125,948	+		Sama_0931	0.73	-1.1
1,125,949	-		Sama_0931	0.73	-0.7
1,125,949	-		Sama_0931	0.73	+0.5
1,125,953	+		Sama_0931	0.73	+0.4
1,125,954	-		Sama_0931	0.73	+1.5
1,125,954	-		Sama_0931	0.73	+1.8
1,125,954	-		Sama_0931	0.73	-2.1
1,125,955	+		Sama_0931	0.73	+1.4
1,125,956	-		Sama_0931	0.73	-0.6
1,125,976	+		Sama_0931	0.74	-0.7
1,125,976	+		Sama_0931	0.74	+1.8
1,125,976	+		Sama_0931	0.74	-0.6
1,125,977	-		Sama_0931	0.74	+1.2
1,125,977	-		Sama_0931	0.74	+0.9
1,125,981	+		Sama_0931	0.74	-1.3
1,125,981	+		Sama_0931	0.74	-0.3
1,125,981	+		Sama_0931	0.74	-2.2
1,125,981	+		Sama_0931	0.74	+0.9
1,125,981	+		Sama_0931	0.74	-0.7
1,125,982	-		Sama_0931	0.74	+1.5
1,125,986	-		Sama_0931	0.74	-0.3
1,125,986	-		Sama_0931	0.74	-0.3
1,126,003	+		Sama_0931	0.74	+1.5
1,126,004	-		Sama_0931	0.74	+0.6
1,126,004	-		Sama_0931	0.74	+1.0
1,126,004	-		Sama_0931	0.74	-0.7
1,126,005	+		Sama_0931	0.74	+1.3
1,126,005	+		Sama_0931	0.74	+1.0
1,126,005	+		Sama_0931	0.74	+0.4
1,126,005	+		Sama_0931	0.74	-1.1
1,126,005	+		Sama_0931	0.74	-0.1
1,126,005	+		Sama_0931	0.74	+2.2
1,126,006	-		Sama_0931	0.74	+1.3
1,126,006	-		Sama_0931	0.74	-1.7
1,126,015	+		Sama_0931	0.75	+0.3
1,126,016	-		Sama_0931	0.75	-1.5
1,126,016	-		Sama_0931	0.75	-1.5
1,126,033	+		Sama_0931	0.75	-1.5
1,126,033	+		Sama_0931	0.75	+2.3
1,126,033	+		Sama_0931	0.75	+0.7
1,126,033	+		Sama_0931	0.75	-0.3
1,126,033	+		Sama_0931	0.75	+1.0
1,126,033	+		Sama_0931	0.75	+0.5
1,126,036	+		Sama_0931	0.75	+3.1
1,126,036	+		Sama_0931	0.75	-1.5
1,126,037	-		Sama_0931	0.75	+0.3
1,126,114	+		Sama_0931	0.77	+1.0
1,126,135	+		Sama_0931	0.78	-1.3
1,126,135	+		Sama_0931	0.78	+0.0
1,126,135	+		Sama_0931	0.78	+1.0
1,126,135	+		Sama_0931	0.78	-1.5
1,126,149	+		Sama_0931	0.78	-0.3
1,126,177	+		Sama_0931	0.79	-2.1
1,126,177	+		Sama_0931	0.79	+0.4
1,126,187	+		Sama_0931	0.79	+0.5
1,126,187	+		Sama_0931	0.79	+0.5
1,126,211	+		Sama_0931	0.80	+1.6
1,126,217	-		Sama_0931	0.80	-0.3
1,126,233	+		Sama_0931	0.81	-0.1
1,126,233	+		Sama_0931	0.81	+0.3
1,126,255	+		Sama_0931	0.81	+0.0
1,126,264	+		Sama_0931	0.82	-0.2
1,126,264	+		Sama_0931	0.82	-1.1
1,126,264	+		Sama_0931	0.82	-1.5
1,126,269	+		Sama_0931	0.82	+1.8
1,126,289	+		Sama_0931	0.82	+1.3
1,126,290	-		Sama_0931	0.82	-2.3
1,126,300	+		Sama_0931	0.83	+1.4
1,126,365	+		Sama_0931	0.84	+1.0
1,126,366	-		Sama_0931	0.84	-1.4
1,126,380	+		Sama_0931	0.85	+0.3
1,126,380	+		Sama_0931	0.85	-1.5
1,126,380	+		Sama_0931	0.85	-2.1
1,126,428	+		Sama_0931	0.86	-1.2
1,126,489	+		Sama_0931	0.88	-0.7
1,126,515	-		Sama_0931	0.89	+1.2
1,126,515	-		Sama_0931	0.89	-1.0
1,126,567	-				+0.9
1,126,586	-				-1.1
1,126,586	-				+2.6
1,126,653	+				+0.6
1,126,655	+				-0.7
1,126,655	+				+0.3
1,126,655	+				+0.8
1,126,657	+				-2.8
1,126,657	+				-1.5
1,126,658	-				-0.7
1,126,697	+				-1.3
1,126,697	+				-0.1
1,126,698	-				+0.2
1,126,698	-				-1.1
1,126,699	+				-2.1
1,126,699	+				-0.1
1,126,700	-				-0.7
1,126,723	+				+0.4
1,126,797	+				+1.1
1,126,824	+				+2.8
1,126,829	-				-2.1
1,126,907	+				+0.7
1,126,925	+				-0.6
1,126,925	+				-0.5
1,126,925	+				+0.8
1,126,950	+				-0.3
1,127,024	+		Sama_0932	0.20	+0.3
1,127,025	-		Sama_0932	0.20	-1.5
1,127,038	+		Sama_0932	0.23	-1.1
1,127,038	+		Sama_0932	0.23	+2.3
1,127,043	+		Sama_0932	0.25	-0.5
1,127,043	+		Sama_0932	0.25	-0.5
1,127,044	-		Sama_0932	0.25	-0.3
1,127,044	-		Sama_0932	0.25	-2.8
1,127,047	+		Sama_0932	0.26	+1.3
1,127,047	+		Sama_0932	0.26	+0.5
1,127,117	-		Sama_0932	0.43	-0.5
1,127,137	+		Sama_0932	0.48	+0.3
1,127,165	+		Sama_0932	0.55	+1.7
1,127,200	+		Sama_0932	0.64	+2.1
1,127,202	+		Sama_0932	0.64	-1.9
1,127,203	-		Sama_0932	0.65	-1.1
1,127,238	+		Sama_0932	0.73	-2.2
1,127,268	+		Sama_0932	0.81	-1.3
1,127,292	+		Sama_0932	0.87	-3.2
1,127,292	+		Sama_0932	0.87	+1.3
1,127,345	+				+2.1
1,127,362	+				-0.9
1,127,390	+				+0.7
1,127,391	-				+0.3
1,127,403	+				+0.8
1,127,403	+				+0.0
1,127,421	+				-2.6
1,127,422	-				+2.4
1,127,423	+				+1.6
1,127,423	+				-0.1
1,127,424	-				-1.3
1,127,512	+				-0.7
1,127,534	+				+1.1
1,127,534	+				+2.4
1,127,538	-				+1.3
1,127,550	+				-2.2
1,127,588	+				+0.6
1,127,625	-				-2.3
1,127,631	-				-1.5
1,127,695	+				-2.1
1,127,696	-				-1.1
1,127,728	+				-0.7
1,127,728	+				+1.3
1,127,729	-				-1.1
1,127,729	-				-2.6
1,127,745	-				-1.1
1,127,745	-				+2.0
1,127,745	-				-1.5
1,127,752	-				+2.5
1,127,752	-				+1.6
1,127,753	+		Sama_0933	0.10	-0.5
1,127,753	+		Sama_0933	0.10	-0.7
1,127,753	+		Sama_0933	0.10	-0.7
1,127,753	+		Sama_0933	0.10	+0.9
1,127,753	+		Sama_0933	0.10	+1.8
1,127,753	+		Sama_0933	0.10	-2.9
1,127,754	-		Sama_0933	0.10	-0.3
1,127,754	-		Sama_0933	0.10	-2.1
1,127,794	+		Sama_0933	0.18	-0.3
1,127,794	+		Sama_0933	0.18	-0.7
1,127,795	-		Sama_0933	0.19	+1.3
1,127,795	-		Sama_0933	0.19	-1.3
1,127,795	-		Sama_0933	0.19	-1.1
1,127,799	+		Sama_0933	0.20	-1.7
1,127,799	+		Sama_0933	0.20	-0.1
1,127,886	+		Sama_0933	0.37	-0.5
1,127,889	-		Sama_0933	0.38	+0.4
1,127,925	-		Sama_0933	0.45	+0.6
1,127,928	-		Sama_0933	0.46	+1.3
1,127,929	+		Sama_0933	0.46	+2.9
1,127,930	-		Sama_0933	0.46	+0.3
1,127,937	+		Sama_0933	0.48	+0.3
1,127,938	-		Sama_0933	0.48	+0.3
1,127,939	+		Sama_0933	0.48	+1.0
1,127,940	-		Sama_0933	0.48	+2.2
1,127,973	-		Sama_0933	0.55	-1.7
1,127,973	-		Sama_0933	0.55	+2.1
1,127,973	-		Sama_0933	0.55	-0.7
1,128,000	-		Sama_0933	0.60	-1.1
1,128,013	+		Sama_0933	0.63	-0.5
1,128,014	-		Sama_0933	0.63	-2.7
1,128,014	-		Sama_0933	0.63	+1.8
1,128,111	+		Sama_0933	0.83	-1.3
1,128,112	-		Sama_0933	0.83	+2.0
1,128,119	+		Sama_0933	0.85	+0.8
1,128,120	-		Sama_0933	0.85	-1.9
1,128,120	-		Sama_0933	0.85	-0.1
1,128,123	+		Sama_0933	0.85	-0.8
1,128,129	+		Sama_0933	0.87	-1.5
1,128,130	-		Sama_0933	0.87	+1.5
1,128,130	-		Sama_0933	0.87	-1.5
1,128,166	-				-1.7
1,128,170	+				+0.9
1,128,171	-				-0.4
1,128,189	-				+1.0
1,128,196	+				-1.7
1,128,199	-				+1.2
1,128,199	-				+1.3
1,128,212	+				+2.9
1,128,212	+				-1.1
1,128,227	+				+0.8
1,128,253	-				-0.7
1,128,291	+				+1.3
1,128,292	-				+0.7
1,128,296	+				+0.9
1,128,297	-				+1.8
1,128,301	+				+0.0
1,128,301	+				+0.7
1,128,301	+				+0.9
1,128,301	+				-0.7
1,128,302	-				+1.8
1,128,302	-				-0.4
1,128,302	-				-1.3