Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31900

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
3,343,201	-				+0.6
3,343,252	+				-0.1
3,343,260	-				+0.7
3,343,314	-				+1.1
3,343,385	+				-1.1
3,343,400	+				+0.5
3,343,408	-				+0.3
3,343,449	-				+0.1
3,343,464	-				-1.3
3,343,472	+		PGA1_c31890	0.11	-0.5
3,343,480	-		PGA1_c31890	0.12	+0.2
3,343,544	+		PGA1_c31890	0.20	+0.2
3,343,650	+		PGA1_c31890	0.34	-1.1
3,343,677	+		PGA1_c31890	0.38	-1.0
3,343,677	+		PGA1_c31890	0.38	-0.8
3,343,677	+		PGA1_c31890	0.38	-0.2
3,343,685	-		PGA1_c31890	0.39	+0.1
3,343,732	-		PGA1_c31890	0.45	-0.8
3,343,734	+		PGA1_c31890	0.45	+0.6
3,343,734	+		PGA1_c31890	0.45	+0.1
3,343,734	+		PGA1_c31890	0.45	+0.2
3,343,734	+		PGA1_c31890	0.45	-0.5
3,343,734	+		PGA1_c31890	0.45	+0.2
3,343,734	+		PGA1_c31890	0.45	-0.7
3,343,734	+		PGA1_c31890	0.45	+0.7
3,343,742	-		PGA1_c31890	0.46	+0.7
3,343,742	-		PGA1_c31890	0.46	-0.5
3,343,742	-		PGA1_c31890	0.46	+0.2
3,343,742	-		PGA1_c31890	0.46	-1.1
3,343,742	-		PGA1_c31890	0.46	-1.3
3,343,742	-		PGA1_c31890	0.46	+0.2
3,343,742	-		PGA1_c31890	0.46	+1.0
3,343,768	+		PGA1_c31890	0.50	+0.4
3,343,771	+		PGA1_c31890	0.50	-0.9
3,343,781	+		PGA1_c31890	0.51	-1.0
3,343,784	-		PGA1_c31890	0.52	-0.4
3,343,792	+		PGA1_c31890	0.53	+0.6
3,343,810	-		PGA1_c31890	0.55	+0.4
3,343,812	+		PGA1_c31890	0.55	+0.2
3,343,861	-		PGA1_c31890	0.62	-0.7
3,343,898	+		PGA1_c31890	0.67	-0.4
3,343,913	+		PGA1_c31890	0.69	-1.3
3,343,913	+		PGA1_c31890	0.69	+0.5
3,343,921	-		PGA1_c31890	0.70	+0.5
3,343,939	-		PGA1_c31890	0.72	+0.1
3,343,970	-		PGA1_c31890	0.76	+1.0
3,344,050	-		PGA1_c31890	0.87	+0.6
3,344,083	-				-0.2
3,344,083	-				-0.7
3,344,093	-				-0.4
3,344,171	-				-0.9
3,344,179	+				-0.6
3,344,192	-				+0.9
3,344,192	-				+0.1
3,344,243	+				-1.2
3,344,243	+				+0.3
3,344,258	-				+0.0
3,344,512	-		PGA1_c31900	0.16	+0.1
3,344,531	-		PGA1_c31900	0.17	+0.6
3,344,550	-		PGA1_c31900	0.18	-0.4
3,344,550	-		PGA1_c31900	0.18	-0.2
3,344,620	+		PGA1_c31900	0.21	-0.6
3,344,628	-		PGA1_c31900	0.21	-1.4
3,344,644	-		PGA1_c31900	0.22	+0.4
3,344,684	+		PGA1_c31900	0.24	-0.7
3,344,694	+		PGA1_c31900	0.24	+0.4
3,344,697	-		PGA1_c31900	0.25	-0.1
3,344,723	+		PGA1_c31900	0.26	-2.3
3,344,731	-		PGA1_c31900	0.26	+0.1
3,344,811	-		PGA1_c31900	0.30	-0.6
3,344,872	+		PGA1_c31900	0.33	-1.5
3,344,880	-		PGA1_c31900	0.33	+0.0
3,344,939	-		PGA1_c31900	0.36	-0.2
3,344,939	-		PGA1_c31900	0.36	+0.2
3,344,962	+		PGA1_c31900	0.37	+0.3
3,344,962	-		PGA1_c31900	0.37	-2.0
3,345,045	+		PGA1_c31900	0.41	-0.1
3,345,053	-		PGA1_c31900	0.41	-0.2
3,345,053	-		PGA1_c31900	0.41	+0.9
3,345,061	+		PGA1_c31900	0.42	+0.3
3,345,063	+		PGA1_c31900	0.42	+0.7
3,345,069	-		PGA1_c31900	0.42	-0.8
3,345,069	-		PGA1_c31900	0.42	-1.6
3,345,069	-		PGA1_c31900	0.42	-0.3
3,345,071	-		PGA1_c31900	0.42	-0.3
3,345,101	-		PGA1_c31900	0.44	-0.0
3,345,145	-		PGA1_c31900	0.46	-0.8
3,345,145	-		PGA1_c31900	0.46	-1.3
3,345,178	+		PGA1_c31900	0.47	-0.5
3,345,178	+		PGA1_c31900	0.47	-2.3
3,345,178	+		PGA1_c31900	0.47	+0.6
3,345,178	+		PGA1_c31900	0.47	+0.4
3,345,186	-		PGA1_c31900	0.48	-0.0
3,345,186	-		PGA1_c31900	0.48	+1.1
3,345,218	-		PGA1_c31900	0.49	-0.0
3,345,224	+		PGA1_c31900	0.50	-0.1
3,345,238	-		PGA1_c31900	0.50	+0.0
3,345,259	+		PGA1_c31900	0.51	-0.3
3,345,366	-		PGA1_c31900	0.56	+0.2
3,345,450	+		PGA1_c31900	0.60	-0.5
3,345,473	+		PGA1_c31900	0.61	-0.2
3,345,485	+		PGA1_c31900	0.62	-0.1
3,345,497	+		PGA1_c31900	0.63	-2.2
3,345,497	+		PGA1_c31900	0.63	-0.0
3,345,594	-		PGA1_c31900	0.67	-0.8
3,345,629	-		PGA1_c31900	0.69	-0.3
3,345,658	+		PGA1_c31900	0.70	-0.0
3,345,681	+		PGA1_c31900	0.71	-1.0
3,345,681	+		PGA1_c31900	0.71	-0.7
3,345,689	-		PGA1_c31900	0.72	-0.1
3,345,725	+		PGA1_c31900	0.73	-0.2
3,345,819	+		PGA1_c31900	0.78	+0.3
3,345,863	-		PGA1_c31900	0.80	-2.1
3,345,889	+		PGA1_c31900	0.81	-1.1
3,345,904	-		PGA1_c31900	0.82	-0.4
3,345,912	+		PGA1_c31900	0.82	+0.1
3,345,912	+		PGA1_c31900	0.82	+0.3
3,345,928	-		PGA1_c31900	0.83	-0.2
3,345,962	-		PGA1_c31900	0.85	-1.1
3,345,977	+		PGA1_c31900	0.85	-0.7
3,345,998	+		PGA1_c31900	0.86	-0.7
3,345,998	+		PGA1_c31900	0.86	-0.3
3,346,006	-		PGA1_c31900	0.87	+0.5
3,346,006	-		PGA1_c31900	0.87	+0.5
3,346,006	-		PGA1_c31900	0.87	-0.1
3,346,006	-		PGA1_c31900	0.87	-1.1
3,346,044	+		PGA1_c31900	0.89	-1.0
3,346,044	+		PGA1_c31900	0.89	-0.3
3,346,044	+		PGA1_c31900	0.89	+0.8
3,346,052	-		PGA1_c31900	0.89	-1.1
3,346,052	-		PGA1_c31900	0.89	-1.5
3,346,082	-				-0.2
3,346,128	+				+0.3
3,346,198	+				-0.8
3,346,206	-				-2.1
3,346,245	-				+0.4
3,346,279	+				-1.3
3,346,287	-				-0.9
3,346,360	-				-0.3
3,346,365	-				+0.1
3,346,408	-				+1.1
3,346,445	+				+0.1
3,346,471	-				+0.7
3,346,570	+		PGA1_c31910	0.41	+0.3
3,346,593	+		PGA1_c31910	0.49	-0.3
3,346,598	+		PGA1_c31910	0.51	-1.6
3,346,598	+		PGA1_c31910	0.51	-0.5
3,346,601	-		PGA1_c31910	0.52	+2.3
3,346,603	+		PGA1_c31910	0.52	+1.0
3,346,603	+		PGA1_c31910	0.52	+0.9
3,346,603	+		PGA1_c31910	0.52	-0.2
3,346,603	+		PGA1_c31910	0.52	-0.5
3,346,603	+		PGA1_c31910	0.52	+1.2
3,346,603	+		PGA1_c31910	0.52	-1.4
3,346,603	+		PGA1_c31910	0.52	+0.8
3,346,603	+		PGA1_c31910	0.52	+0.7
3,346,603	+		PGA1_c31910	0.52	-0.1
3,346,603	+		PGA1_c31910	0.52	+0.5
3,346,603	+		PGA1_c31910	0.52	+0.9
3,346,603	+		PGA1_c31910	0.52	+0.9
3,346,603	+		PGA1_c31910	0.52	-1.2
3,346,603	+		PGA1_c31910	0.52	-0.8
3,346,606	-		PGA1_c31910	0.53	+0.6
3,346,611	-		PGA1_c31910	0.55	-0.6
3,346,611	-		PGA1_c31910	0.55	+0.6
3,346,611	-		PGA1_c31910	0.55	-0.4
3,346,611	-		PGA1_c31910	0.55	-1.4
3,346,611	-		PGA1_c31910	0.55	-1.3
3,346,611	-		PGA1_c31910	0.55	-0.6
3,346,611	-		PGA1_c31910	0.55	-0.6
3,346,728	-				-0.2
3,346,773	-				+0.6
3,346,803	+				+0.4
3,346,823	-				+0.0
3,346,853	+				+0.4
3,346,853	+				-0.2
3,346,853	+				-0.5
3,346,855	+				-0.3
3,346,861	-				-0.8
3,346,861	-				+0.0
3,346,863	-				-0.1
3,346,893	+				-0.4
3,346,994	-		PGA1_c31920	0.21	-0.9
3,346,996	+		PGA1_c31920	0.21	+0.4
3,347,004	-		PGA1_c31920	0.22	-0.1
3,347,004	-		PGA1_c31920	0.22	+0.1
3,347,029	+		PGA1_c31920	0.27	-0.5
3,347,042	-		PGA1_c31920	0.29	-1.4
3,347,075	-		PGA1_c31920	0.34	-0.4
3,347,095	+		PGA1_c31920	0.38	+1.1
3,347,103	-		PGA1_c31920	0.39	-0.5
3,347,114	+		PGA1_c31920	0.41	-2.2
3,347,166	-		PGA1_c31920	0.50	-0.3
3,347,176	-		PGA1_c31920	0.52	-1.0
3,347,178	+		PGA1_c31920	0.52	-0.0
3,347,201	+		PGA1_c31920	0.56	-0.5