Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29910

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
3,126,791	+				-0.1
3,126,811	-				-1.5
3,126,813	+				+1.5
3,126,821	-				+0.2
3,126,836	+				+1.4
3,126,843	+				+0.5
3,126,851	-				+1.1
3,126,868	-				-0.1
3,126,868	-				+0.1
3,126,889	-				-0.2
3,126,894	+				+0.6
3,126,899	+				+0.8
3,126,899	+				+0.0
3,126,902	-				-0.7
3,126,902	-				+0.4
3,126,907	-				+0.2
3,126,907	-				-0.1
3,126,907	-				-0.3
3,126,938	+		PGA1_c29900	0.11	+0.0
3,126,956	+		PGA1_c29900	0.21	-0.6
3,127,046	-		PGA1_c29900	0.67	+0.3
3,127,046	-		PGA1_c29900	0.67	-0.5
3,127,112	-				+0.3
3,127,263	-				-1.0
3,127,282	+				-0.7
3,127,283	+				+0.2
3,127,355	-				-2.7
3,127,360	-		PGA1_c29910	0.10	-0.8
3,127,435	+		PGA1_c29910	0.14	-1.3
3,127,443	-		PGA1_c29910	0.14	-0.5
3,127,443	-		PGA1_c29910	0.14	-1.5
3,127,469	+		PGA1_c29910	0.15	+0.1
3,127,512	-		PGA1_c29910	0.17	-0.3
3,127,513	+		PGA1_c29910	0.17	-0.2
3,127,531	+		PGA1_c29910	0.18	+0.1
3,127,533	-		PGA1_c29910	0.18	-0.6
3,127,595	-		PGA1_c29910	0.21	-2.1
3,127,682	+		PGA1_c29910	0.25	-1.8
3,127,705	+		PGA1_c29910	0.26	-2.1
3,127,715	+		PGA1_c29910	0.26	-0.6
3,127,715	+		PGA1_c29910	0.26	-0.9
3,127,741	+		PGA1_c29910	0.28	-0.5
3,127,741	+		PGA1_c29910	0.28	+0.5
3,127,741	+		PGA1_c29910	0.28	-1.3
3,127,761	-		PGA1_c29910	0.28	-0.1
3,127,780	-		PGA1_c29910	0.29	-1.4
3,127,783	-		PGA1_c29910	0.29	-1.0
3,127,783	-		PGA1_c29910	0.29	-0.4
3,127,785	-		PGA1_c29910	0.30	-0.4
3,127,850	-		PGA1_c29910	0.33	-0.8
3,127,851	-		PGA1_c29910	0.33	-1.4
3,127,869	+		PGA1_c29910	0.33	-0.9
3,127,885	-		PGA1_c29910	0.34	-1.3
3,127,885	-		PGA1_c29910	0.34	-1.0
3,127,885	-		PGA1_c29910	0.34	-1.6
3,127,914	+		PGA1_c29910	0.35	+0.8
3,127,947	-		PGA1_c29910	0.37	-0.0
3,127,970	+		PGA1_c29910	0.38	-0.4
3,127,994	+		PGA1_c29910	0.39	-0.3
3,128,000	-		PGA1_c29910	0.39	+0.5
3,128,056	+		PGA1_c29910	0.42	-0.9
3,128,056	+		PGA1_c29910	0.42	-1.0
3,128,056	+		PGA1_c29910	0.42	-3.5
3,128,064	-		PGA1_c29910	0.42	-3.6
3,128,075	-		PGA1_c29910	0.43	-0.7
3,128,086	-		PGA1_c29910	0.43	-1.2
3,128,108	-		PGA1_c29910	0.44	-2.0
3,128,121	+		PGA1_c29910	0.45	-1.1
3,128,179	+		PGA1_c29910	0.48	-1.6
3,128,179	+		PGA1_c29910	0.48	-1.7
3,128,187	-		PGA1_c29910	0.48	-1.5
3,128,214	-		PGA1_c29910	0.49	-1.9
3,128,260	-		PGA1_c29910	0.51	-1.1
3,128,264	-		PGA1_c29910	0.52	-0.2
3,128,267	-		PGA1_c29910	0.52	-1.4
3,128,330	-		PGA1_c29910	0.55	-0.3
3,128,359	-		PGA1_c29910	0.56	-2.1
3,128,362	+		PGA1_c29910	0.56	-0.4
3,128,370	+		PGA1_c29910	0.56	-1.1
3,128,370	-		PGA1_c29910	0.56	-0.1
3,128,370	-		PGA1_c29910	0.56	+0.8
3,128,380	-		PGA1_c29910	0.57	+0.2
3,128,443	+		PGA1_c29910	0.60	-3.2
3,128,454	+		PGA1_c29910	0.60	-1.9
3,128,479	-		PGA1_c29910	0.61	-0.7
3,128,486	+		PGA1_c29910	0.62	-0.1
3,128,590	+		PGA1_c29910	0.66	-0.9
3,128,595	+		PGA1_c29910	0.67	-1.3
3,128,603	-		PGA1_c29910	0.67	-0.7
3,128,603	-		PGA1_c29910	0.67	-0.6
3,128,603	-		PGA1_c29910	0.67	-2.1
3,128,715	+		PGA1_c29910	0.72	-0.1
3,128,736	+		PGA1_c29910	0.73	-0.6
3,128,754	+		PGA1_c29910	0.74	-1.1
3,128,766	+		PGA1_c29910	0.75	-0.2
3,128,829	+		PGA1_c29910	0.77	-0.9
3,128,838	-		PGA1_c29910	0.78	-1.0
3,128,863	-		PGA1_c29910	0.79	-1.8
3,128,897	-		PGA1_c29910	0.81	-1.3
3,128,924	+		PGA1_c29910	0.82	-1.6
3,128,924	+		PGA1_c29910	0.82	+0.2
3,128,931	-		PGA1_c29910	0.82	+0.4
3,128,932	-		PGA1_c29910	0.82	-0.2
3,128,932	-		PGA1_c29910	0.82	-0.3
3,128,932	-		PGA1_c29910	0.82	+0.2
3,128,932	-		PGA1_c29910	0.82	+0.1
3,128,950	+		PGA1_c29910	0.83	-1.1
3,128,950	+		PGA1_c29910	0.83	-0.2
3,128,950	+		PGA1_c29910	0.83	-1.5
3,128,963	-		PGA1_c29910	0.84	-1.8
3,128,963	-		PGA1_c29910	0.84	-0.6
3,129,004	+		PGA1_c29910	0.85	-0.3
3,129,069	-		PGA1_c29910	0.88	+0.5
3,129,092	+		PGA1_c29910	0.90	-1.3
3,129,248	+				+0.0
3,129,273	-				-1.4
3,129,278	-				-1.1
3,129,304	+				-0.3
3,129,304	+				-2.3
3,129,304	+				-0.1
3,129,304	+				-0.9
3,129,304	+				-0.7
3,129,304	+				-0.8
3,129,310	+				-2.0
3,129,342	+				-2.2
3,129,342	+				-0.4
3,129,342	+				-0.2
3,129,342	+				+1.1
3,129,342	+				-1.2
3,129,342	+				+0.0
3,129,342	+				+0.8
3,129,350	-				+0.4
3,129,421	+				-0.3
3,129,427	-				-0.5
3,129,429	-				+0.0
3,129,431	+				-0.0
3,129,431	+				+1.0
3,129,431	+				+0.5
3,129,431	+				-1.6
3,129,431	+				-0.8
3,129,431	+				-0.3
3,129,431	+				+0.3
3,129,431	+				+0.2
3,129,431	+				+0.0
3,129,431	+				-1.4
3,129,431	+				-0.3
3,129,431	+				+0.0
3,129,431	+				-0.1
3,129,431	+				+0.4
3,129,434	-				-0.3
3,129,439	-				-0.2
3,129,439	-				-1.2
3,129,439	-				+0.7
3,129,439	-				+0.2
3,129,439	-				+0.5
3,129,439	-				+0.3
3,129,439	-				-1.4
3,129,439	-				+0.1
3,129,439	-				+0.1
3,129,439	-				+0.5
3,129,439	-				+0.7
3,129,439	-				-0.1
3,129,439	-				-1.1
3,129,439	-				-0.9
3,129,439	-				+0.3
3,129,439	-				+0.1
3,129,439	-				-0.3
3,129,439	-				-0.3
3,129,467	+				+0.7
3,129,501	-				+0.6
3,129,512	+				+0.2
3,129,531	+				-1.3
3,129,554	-				+0.5
3,129,569	+				-0.7
3,129,571	+				-0.5
3,129,577	-				+0.0
3,129,578	+				-0.1
3,129,578	+				+0.5
3,129,579	-				-0.4
3,129,579	-				-0.4
3,129,637	+				+0.3
3,129,646	+		PGA1_c29920	0.10	-0.4
3,129,651	+		PGA1_c29920	0.10	-0.4
3,129,651	+		PGA1_c29920	0.10	-0.1
3,129,654	-		PGA1_c29920	0.11	+1.1
3,129,659	-		PGA1_c29920	0.11	-1.1
3,129,664	-		PGA1_c29920	0.12	-0.9
3,129,718	+		PGA1_c29920	0.17	+1.5
3,129,723	+		PGA1_c29920	0.17	+1.0
3,129,811	-		PGA1_c29920	0.25	-0.3
3,129,816	+		PGA1_c29920	0.25	-1.0
3,129,819	-		PGA1_c29920	0.26	+0.3
3,129,834	+		PGA1_c29920	0.27	+1.2
3,129,843	-		PGA1_c29920	0.28	-1.6
3,129,853	-		PGA1_c29920	0.29	+0.2
3,129,878	-		PGA1_c29920	0.31	-1.5
3,129,883	-		PGA1_c29920	0.32	+0.5
3,129,888	-		PGA1_c29920	0.32	+0.6
3,129,916	+		PGA1_c29920	0.35	-1.2
3,129,916	+		PGA1_c29920	0.35	+1.2
3,129,989	+		PGA1_c29920	0.41	-0.3
3,130,014	+		PGA1_c29920	0.43	-0.5
3,130,046	+		PGA1_c29920	0.46	-0.0
3,130,046	+		PGA1_c29920	0.46	+0.1
3,130,114	-		PGA1_c29920	0.52	+0.1
3,130,115	+		PGA1_c29920	0.53	+0.6
3,130,116	+		PGA1_c29920	0.53	+0.1
3,130,127	+		PGA1_c29920	0.54	+0.3
3,130,138	+		PGA1_c29920	0.55	+0.3
3,130,146	-		PGA1_c29920	0.55	-1.0
3,130,146	-		PGA1_c29920	0.55	+0.0
3,130,154	-		PGA1_c29920	0.56	-0.9
3,130,164	-		PGA1_c29920	0.57	-0.2
3,130,182	+		PGA1_c29920	0.59	+1.2
3,130,182	+		PGA1_c29920	0.59	+0.3
3,130,190	-		PGA1_c29920	0.59	-0.3
3,130,205	+		PGA1_c29920	0.61	+0.9
3,130,208	-		PGA1_c29920	0.61	-0.1
3,130,213	-		PGA1_c29920	0.61	+1.0
3,130,227	+		PGA1_c29920	0.63	-0.2
3,130,238	+		PGA1_c29920	0.64	-0.1
3,130,246	-		PGA1_c29920	0.64	+0.1
3,130,265	-		PGA1_c29920	0.66	+0.7
3,130,293	+		PGA1_c29920	0.69	+0.3
3,130,303	+		PGA1_c29920	0.70	-0.3