Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28860

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
3,025,356	-				-0.5
3,025,356	-				+0.3
3,025,356	-				-1.0
3,025,356	-				-0.3
3,025,356	-				+0.2
3,025,356	-				+0.4
3,025,356	-				+0.8
3,025,356	-				-0.3
3,025,356	-				-1.0
3,025,464	+				-0.6
3,025,469	+				-0.3
3,025,474	+				-0.2
3,025,477	-				-0.2
3,025,494	-				-0.6
3,025,653	+		PGA1_c28850	0.21	-0.3
3,025,653	+		PGA1_c28850	0.21	-0.2
3,025,653	+		PGA1_c28850	0.21	-0.1
3,025,666	-		PGA1_c28850	0.23	+1.8
3,025,666	-		PGA1_c28850	0.23	-0.1
3,025,720	+		PGA1_c28850	0.29	-0.2
3,025,749	-		PGA1_c28850	0.33	-0.7
3,025,759	+		PGA1_c28850	0.34	-0.3
3,025,764	+		PGA1_c28850	0.34	+0.5
3,025,767	-		PGA1_c28850	0.35	+0.3
3,025,772	-		PGA1_c28850	0.35	-0.7
3,025,772	-		PGA1_c28850	0.35	+0.5
3,025,772	-		PGA1_c28850	0.35	+0.6
3,025,970	+		PGA1_c28850	0.59	+0.0
3,025,978	-		PGA1_c28850	0.60	-1.0
3,025,978	-		PGA1_c28850	0.60	-0.5
3,025,978	-		PGA1_c28850	0.60	+0.3
3,025,978	-		PGA1_c28850	0.60	-0.0
3,025,978	-		PGA1_c28850	0.60	+0.1
3,026,034	+		PGA1_c28850	0.66	-0.4
3,026,034	+		PGA1_c28850	0.66	-1.1
3,026,092	+		PGA1_c28850	0.73	+0.4
3,026,092	+		PGA1_c28850	0.73	-1.4
3,026,092	+		PGA1_c28850	0.73	+0.2
3,026,092	+		PGA1_c28850	0.73	-1.7
3,026,092	+		PGA1_c28850	0.73	-1.8
3,026,092	+		PGA1_c28850	0.73	-0.1
3,026,092	+		PGA1_c28850	0.73	-0.1
3,026,092	+		PGA1_c28850	0.73	-0.2
3,026,092	+		PGA1_c28850	0.73	+0.6
3,026,092	+		PGA1_c28850	0.73	-0.8
3,026,098	-		PGA1_c28850	0.74	-0.1
3,026,099	+		PGA1_c28850	0.74	+0.2
3,026,100	-		PGA1_c28850	0.74	+1.4
3,026,100	-		PGA1_c28850	0.74	-0.1
3,026,100	-		PGA1_c28850	0.74	+0.5
3,026,100	-		PGA1_c28850	0.74	+0.1
3,026,100	-		PGA1_c28850	0.74	+0.9
3,026,100	-		PGA1_c28850	0.74	-0.1
3,026,100	-		PGA1_c28850	0.74	-2.3
3,026,100	-		PGA1_c28850	0.74	-0.6
3,026,100	-		PGA1_c28850	0.74	+0.4
3,026,100	-		PGA1_c28850	0.74	-1.4
3,026,100	-		PGA1_c28850	0.74	-0.6
3,026,100	-		PGA1_c28850	0.74	-0.0
3,026,100	-		PGA1_c28850	0.74	-0.2
3,026,100	-		PGA1_c28850	0.74	-0.4
3,026,110	+		PGA1_c28850	0.75	-0.6
3,026,138	-		PGA1_c28850	0.78	+0.3
3,026,138	-		PGA1_c28850	0.78	+0.6
3,026,223	-		PGA1_c28850	0.88	+0.5
3,026,240	+				-0.0
3,026,240	+				-0.1
3,026,240	+				-0.3
3,026,290	+				+0.1
3,026,373	-				-0.8
3,026,400	-				+0.8
3,026,415	-				+0.0
3,026,431	+				-0.4
3,026,431	+				+0.0
3,026,446	-				+0.4
3,026,515	+		PGA1_c28860	0.14	+0.5
3,026,530	+		PGA1_c28860	0.16	-0.8
3,026,530	+		PGA1_c28860	0.16	-0.4
3,026,530	+		PGA1_c28860	0.16	-0.8
3,026,538	-		PGA1_c28860	0.16	+0.8
3,026,589	-		PGA1_c28860	0.21	-2.0
3,026,612	-		PGA1_c28860	0.23	-0.5
3,026,642	-		PGA1_c28860	0.25	+0.3
3,026,682	-		PGA1_c28860	0.29	-0.3
3,026,696	-		PGA1_c28860	0.30	-0.2
3,026,789	+		PGA1_c28860	0.38	-1.0
3,026,810	+		PGA1_c28860	0.40	-0.0
3,026,818	-		PGA1_c28860	0.41	+0.4
3,026,822	+		PGA1_c28860	0.41	+1.1
3,026,823	-		PGA1_c28860	0.41	-1.1
3,026,870	-		PGA1_c28860	0.46	-0.3
3,026,931	+		PGA1_c28860	0.51	+1.7
3,026,932	-		PGA1_c28860	0.51	-0.2
3,026,939	-		PGA1_c28860	0.52	+1.6
3,026,939	-		PGA1_c28860	0.52	+0.9
3,026,984	-		PGA1_c28860	0.56	+0.0
3,026,984	-		PGA1_c28860	0.56	-0.2
3,026,993	+		PGA1_c28860	0.56	+0.3
3,026,995	+		PGA1_c28860	0.57	+0.3
3,027,001	-		PGA1_c28860	0.57	+0.3
3,027,003	-		PGA1_c28860	0.57	-2.2
3,027,016	-		PGA1_c28860	0.58	-0.1
3,027,066	-		PGA1_c28860	0.63	+0.7
3,027,170	-		PGA1_c28860	0.72	-0.1
3,027,177	-		PGA1_c28860	0.73	-2.1
3,027,239	+		PGA1_c28860	0.78	-0.4
3,027,259	+		PGA1_c28860	0.80	-0.0
3,027,262	-		PGA1_c28860	0.80	+1.1
3,027,338	+		PGA1_c28860	0.87	+0.3
3,027,341	-		PGA1_c28860	0.87	+0.6
3,027,346	-		PGA1_c28860	0.87	-3.1
3,027,416	+				-0.4
3,027,429	+				+0.1
3,027,496	+				+0.4
3,027,514	-				-0.4
3,027,538	-				+0.8
3,027,543	-				-0.9
3,027,562	+				+0.8
3,027,567	+				-0.3
3,027,570	-				+0.6
3,027,576	-				+1.1
3,027,578	+				+0.8
3,027,742	-				+1.1
3,027,832	+				+0.4
3,027,832	+				-0.2
3,027,840	-				+0.0
3,027,875	-		PGA1_c28870	0.11	-0.7
3,027,875	-		PGA1_c28870	0.11	+0.1
3,027,878	-		PGA1_c28870	0.11	-0.7
3,027,889	+		PGA1_c28870	0.11	-0.6
3,027,889	+		PGA1_c28870	0.11	-0.2
3,027,948	-		PGA1_c28870	0.14	+0.3
3,027,950	+		PGA1_c28870	0.14	+0.4
3,027,995	+		PGA1_c28870	0.15	-0.7
3,028,098	-		PGA1_c28870	0.19	-0.1
3,028,118	+		PGA1_c28870	0.20	+0.3
3,028,118	+		PGA1_c28870	0.20	+0.2
3,028,150	-		PGA1_c28870	0.21	+0.3
3,028,193	+		PGA1_c28870	0.22	+0.4
3,028,260	-		PGA1_c28870	0.24	-2.9
3,028,275	-		PGA1_c28870	0.25	+0.6
3,028,309	+		PGA1_c28870	0.26	-2.4
3,028,327	-		PGA1_c28870	0.27	-0.3
3,028,348	+		PGA1_c28870	0.28	-0.0
3,028,374	+		PGA1_c28870	0.29	-1.3
3,028,392	-		PGA1_c28870	0.29	+1.1
3,028,433	-		PGA1_c28870	0.31	-0.4
3,028,462	+		PGA1_c28870	0.32	+0.7
3,028,462	+		PGA1_c28870	0.32	-0.0
3,028,462	+		PGA1_c28870	0.32	+0.8