Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c24060

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
2,510,385	+		PGA1_c24040	0.50	+0.1
2,510,385	+		PGA1_c24040	0.50	-0.3
2,510,417	+		PGA1_c24040	0.56	-0.4
2,510,417	+		PGA1_c24040	0.56	+0.1
2,510,522	-		PGA1_c24040	0.76	-0.4
2,510,522	-		PGA1_c24040	0.76	-1.0
2,510,549	-		PGA1_c24040	0.81	+0.2
2,510,563	+		PGA1_c24040	0.84	-0.4
2,510,563	+		PGA1_c24040	0.84	-0.6
2,510,589	-		PGA1_c24040	0.89	+0.1
2,510,666	+				-0.1
2,510,674	-				+1.9
2,510,674	-				+1.0
2,510,674	-				-0.0
2,510,674	-				+0.2
2,510,674	-				-0.4
2,510,687	+				+0.5
2,510,689	+				-0.4
2,510,689	+				+0.2
2,511,041	-		PGA1_c24050	0.53	-0.5
2,511,041	-		PGA1_c24050	0.53	-0.1
2,511,133	+		PGA1_c24050	0.83	-0.7
2,511,144	+		PGA1_c24050	0.86	-0.1
2,511,165	+				-1.1
2,511,191	-				-0.3
2,511,192	+				-0.2
2,511,249	-				+0.6
2,511,267	+				+0.0
2,511,275	-				-0.4
2,511,281	+				-0.5
2,511,289	-				+0.5
2,511,289	-				+1.1
2,511,289	-				-0.2
2,511,290	+				+0.4
2,511,300	+				+1.1
2,511,313	-				+0.8
2,511,410	-		PGA1_c24060	0.41	-0.1
2,511,440	-		PGA1_c24060	0.51	-0.9
2,511,452	+		PGA1_c24060	0.56	+0.5
2,511,452	+		PGA1_c24060	0.56	+1.3
2,511,455	-		PGA1_c24060	0.57	+0.9
2,511,460	-		PGA1_c24060	0.58	+0.1
2,511,460	-		PGA1_c24060	0.58	+0.1
2,511,474	+		PGA1_c24060	0.63	-0.1
2,511,513	-		PGA1_c24060	0.77	+1.0
2,511,538	+		PGA1_c24060	0.85	+0.7
2,511,540	-		PGA1_c24060	0.86	+0.2
2,511,664	+				+0.2
2,511,664	+				+1.6
2,511,672	-		PGA1_c24070	0.10	+0.6
2,511,681	+		PGA1_c24070	0.14	+0.4
2,511,689	-		PGA1_c24070	0.17	+0.2
2,511,703	-		PGA1_c24070	0.23	+0.6
2,511,719	+		PGA1_c24070	0.30	-0.7
2,511,720	+		PGA1_c24070	0.30	-0.4
2,511,741	+		PGA1_c24070	0.39	+0.0
2,511,741	+		PGA1_c24070	0.39	-0.0
2,511,743	+		PGA1_c24070	0.40	-0.1
2,511,749	-		PGA1_c24070	0.42	-0.1
2,511,773	+		PGA1_c24070	0.52	-0.6
2,511,823	-		PGA1_c24070	0.73	+0.8
2,511,829	-		PGA1_c24070	0.75	-0.4
2,511,830	-		PGA1_c24070	0.76	-1.5
2,511,839	-		PGA1_c24070	0.80	+0.4
2,511,889	+				+0.4
2,511,889	-				-0.2
2,511,897	-				-0.3
2,511,897	-				+1.2
2,511,899	+				+1.6
2,511,912	+				+0.7
2,511,920	-				-0.5
2,511,927	-				-0.2
2,511,949	+				-1.0
2,511,949	+				-0.5
2,511,970	+				-0.8
2,511,974	+				-1.1
2,511,993	+				-1.0
2,512,001	-				-0.6
2,512,029	+				-0.3
2,512,037	-				-0.0
2,512,043	+				+0.8
2,512,063	+				+0.4
2,512,063	+				-0.1
2,512,063	+				+0.2
2,512,071	-				-0.9
2,512,071	-				-0.5
2,512,071	-				-1.1
2,512,085	-				-0.2
2,512,085	-				+0.1
2,512,148	-				-0.2
2,512,174	+				+0.3
2,512,182	-				+0.7
2,512,192	-				-0.2
2,512,194	+				+0.1
2,512,222	+				+0.6
2,512,252	-				-0.6
2,512,458	-				-0.8
2,512,474	-				+0.4
2,512,513	-				+0.2
2,512,535	+		PGA1_c24080	0.12	+0.4
2,512,535	+		PGA1_c24080	0.12	+0.0
2,512,535	+		PGA1_c24080	0.12	+0.7
2,512,535	+		PGA1_c24080	0.12	+0.1
2,512,556	+		PGA1_c24080	0.15	-0.9
2,512,570	-		PGA1_c24080	0.17	-0.5
2,512,574	-		PGA1_c24080	0.17	-1.3
2,512,579	-		PGA1_c24080	0.18	+1.3