Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23150

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
2,399,238	+				-0.9
2,399,251	+				-0.4
2,399,261	-				-0.0
2,399,263	+				-0.6
2,399,266	-				+1.0
2,399,280	-				-0.5
2,399,306	-		PGA1_c23140	0.12	-0.6
2,399,306	-		PGA1_c23140	0.12	+0.3
2,399,306	-		PGA1_c23140	0.12	+1.2
2,399,353	+		PGA1_c23140	0.17	-0.2
2,399,375	-		PGA1_c23140	0.19	+0.3
2,399,402	+		PGA1_c23140	0.22	+0.3
2,399,445	+		PGA1_c23140	0.26	-0.5
2,399,445	+		PGA1_c23140	0.26	+0.3
2,399,453	-		PGA1_c23140	0.27	+0.8
2,399,465	-		PGA1_c23140	0.28	+0.5
2,399,488	-		PGA1_c23140	0.31	-0.2
2,399,510	-		PGA1_c23140	0.33	+0.4
2,399,515	-		PGA1_c23140	0.33	+0.1
2,399,585	+		PGA1_c23140	0.40	-1.3
2,399,637	+		PGA1_c23140	0.45	-0.2
2,399,637	+		PGA1_c23140	0.45	-0.4
2,399,663	+		PGA1_c23140	0.48	+0.6
2,399,694	+		PGA1_c23140	0.51	+0.6
2,399,757	-		PGA1_c23140	0.58	-1.3
2,399,785	+		PGA1_c23140	0.60	+0.1
2,399,914	+		PGA1_c23140	0.73	+0.0
2,399,918	+		PGA1_c23140	0.74	-0.3
2,399,922	-		PGA1_c23140	0.74	-0.3
2,399,926	-		PGA1_c23140	0.74	+2.0
2,399,945	+		PGA1_c23140	0.76	-0.7
2,399,956	+		PGA1_c23140	0.78	+0.2
2,399,977	-		PGA1_c23140	0.80	+1.1
2,400,021	-		PGA1_c23140	0.84	-0.1
2,400,054	-		PGA1_c23140	0.87	-2.2
2,400,069	+		PGA1_c23140	0.89	+0.3
2,400,090	+				+0.1
2,400,103	-				+0.3
2,400,113	+				+0.2
2,400,118	+				+0.9
2,400,149	+				-1.1
2,400,158	+				+0.3
2,400,158	+				-0.3
2,400,158	+				-0.3
2,400,173	+				+0.9
2,400,173	+				-0.2
2,400,181	-				-0.0
2,400,181	-				-0.3
2,400,181	-				+0.7
2,400,181	-				-1.2
2,400,181	-				-0.6
2,400,181	-				+0.5
2,400,181	-				-1.1
2,400,210	-				+0.6
2,400,215	-				+0.8
2,400,234	-				-0.2
2,400,315	-		PGA1_c23150	0.13	-0.2
2,400,317	+		PGA1_c23150	0.13	-0.1
2,400,336	-		PGA1_c23150	0.15	-1.1
2,400,391	-		PGA1_c23150	0.20	+0.4
2,400,469	-		PGA1_c23150	0.28	-1.0
2,400,471	-		PGA1_c23150	0.28	+1.3
2,400,471	-		PGA1_c23150	0.28	-0.0
2,400,523	+		PGA1_c23150	0.33	+0.9
2,400,523	+		PGA1_c23150	0.33	-0.5
2,400,621	-		PGA1_c23150	0.43	+0.6
2,400,681	+		PGA1_c23150	0.49	+1.0
2,400,684	+		PGA1_c23150	0.50	+0.6
2,400,731	-		PGA1_c23150	0.54	-0.4
2,400,771	+		PGA1_c23150	0.58	-0.0
2,400,826	-		PGA1_c23150	0.64	+0.5
2,400,855	-		PGA1_c23150	0.67	+0.2
2,400,899	+		PGA1_c23150	0.71	-0.1
2,400,907	-		PGA1_c23150	0.72	-0.3
2,400,976	+		PGA1_c23150	0.79	+0.8
2,400,976	+		PGA1_c23150	0.79	-0.4
2,400,997	+		PGA1_c23150	0.81	+0.4
2,401,046	+		PGA1_c23150	0.86	+0.3
2,401,046	+		PGA1_c23150	0.86	+0.3
2,401,059	-		PGA1_c23150	0.87	-0.4
2,401,084	-		PGA1_c23150	0.90	-1.0
2,401,219	-				-0.8
2,401,239	+				-0.7
2,401,272	+				-0.4
2,401,365	+		PGA1_c23160	0.15	-0.1
2,401,365	+		PGA1_c23160	0.15	-0.4
2,401,483	+		PGA1_c23160	0.24	-0.4
2,401,517	+		PGA1_c23160	0.26	-0.1
2,401,553	+		PGA1_c23160	0.29	+0.6
2,401,561	-		PGA1_c23160	0.30	-0.1
2,401,561	-		PGA1_c23160	0.30	+0.0
2,401,566	-		PGA1_c23160	0.30	-0.6
2,401,622	-		PGA1_c23160	0.34	+0.8
2,401,682	+		PGA1_c23160	0.39	-1.0
2,401,743	-		PGA1_c23160	0.44	-1.5
2,401,746	-		PGA1_c23160	0.44	-1.4
2,401,751	-		PGA1_c23160	0.44	+0.3
2,401,848	+		PGA1_c23160	0.52	+0.5
2,401,874	-		PGA1_c23160	0.54	+0.5
2,401,890	-		PGA1_c23160	0.55	+0.1
2,401,914	+		PGA1_c23160	0.57	-1.5
2,401,949	+		PGA1_c23160	0.60	+0.9
2,401,981	+		PGA1_c23160	0.62	-0.3
2,401,981	+		PGA1_c23160	0.62	+0.4
2,401,981	+		PGA1_c23160	0.62	-0.1
2,401,981	+		PGA1_c23160	0.62	-1.2
2,401,981	+		PGA1_c23160	0.62	+0.3
2,401,989	-		PGA1_c23160	0.63	+0.2
2,401,989	-		PGA1_c23160	0.63	-0.2
2,401,989	-		PGA1_c23160	0.63	+0.1
2,401,989	-		PGA1_c23160	0.63	-2.3
2,401,989	-		PGA1_c23160	0.63	-0.5
2,402,055	-		PGA1_c23160	0.68	-0.5
2,402,087	+		PGA1_c23160	0.70	-0.4
2,402,087	+		PGA1_c23160	0.70	-0.7