Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15020

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
1,560,526	+		PGA1_c15010	0.69	+1.0
1,560,536	-		PGA1_c15010	0.69	-0.2
1,560,544	+		PGA1_c15010	0.70	-0.5
1,560,549	+		PGA1_c15010	0.70	-0.2
1,560,559	+		PGA1_c15010	0.70	-0.6
1,560,567	-		PGA1_c15010	0.71	+0.6
1,560,671	+		PGA1_c15010	0.77	-0.5
1,560,679	-		PGA1_c15010	0.77	-1.0
1,560,699	-		PGA1_c15010	0.78	+0.5
1,560,815	+		PGA1_c15010	0.84	-0.5
1,560,835	-		PGA1_c15010	0.85	-0.4
1,560,908	+		PGA1_c15010	0.89	-1.1
1,561,056	-				-0.0
1,561,058	+				+0.1
1,561,058	+				-1.0
1,561,061	-				-2.5
1,561,066	-				-0.3
1,561,178	+				+0.9
1,561,326	-				-0.0
1,561,347	-				-0.1
1,561,444	+				-0.2
1,561,460	-				+0.3
1,561,495	-				+0.4
1,561,553	-				+0.3
1,561,590	+		PGA1_c15020	0.12	+0.6
1,561,590	+		PGA1_c15020	0.12	+0.5
1,561,608	-		PGA1_c15020	0.15	+0.4
1,561,614	+		PGA1_c15020	0.16	+0.2
1,561,657	+		PGA1_c15020	0.21	+1.2
1,561,657	+		PGA1_c15020	0.21	+0.6
1,561,693	+		PGA1_c15020	0.26	+1.3
1,561,705	+		PGA1_c15020	0.27	+2.3
1,561,723	+		PGA1_c15020	0.30	+0.9
1,561,836	+		PGA1_c15020	0.44	+1.3
1,561,837	-		PGA1_c15020	0.44	+0.7
1,561,837	-		PGA1_c15020	0.44	+0.9
1,561,881	+		PGA1_c15020	0.50	+0.6
1,561,889	-		PGA1_c15020	0.51	+0.8
1,561,918	+		PGA1_c15020	0.55	+0.0
1,562,010	-		PGA1_c15020	0.67	-0.1
1,562,068	-		PGA1_c15020	0.74	-2.1
1,562,200	-				-0.7
1,562,222	-				-0.3
1,562,235	-				+0.2
1,562,241	-				+0.6
1,562,286	-				+0.1
1,562,286	-				+0.8
1,562,309	-				-0.6
1,562,321	+				-0.4
1,562,367	+				+0.1
1,562,367	+				-0.8
1,562,367	+				-1.4
1,562,367	+				-1.6
1,562,373	+				-0.2
1,562,375	-				-0.0
1,562,402	-				+0.1
1,562,431	+				+0.5
1,562,465	+				+0.5
1,562,473	-				-1.9
1,562,473	-				-0.3
1,562,483	-				+0.3
1,562,492	+				-0.5
1,562,500	-				+0.4
1,562,531	-		PGA1_c15030	0.13	+0.4
1,562,590	+		PGA1_c15030	0.18	-0.3
1,562,595	+		PGA1_c15030	0.19	-0.4
1,562,598	-		PGA1_c15030	0.19	+0.4
1,562,617	+		PGA1_c15030	0.21	+0.3
1,562,625	-		PGA1_c15030	0.22	+0.4
1,562,744	+		PGA1_c15030	0.33	-0.9
1,562,751	+		PGA1_c15030	0.34	+0.2
1,562,759	-		PGA1_c15030	0.35	+0.2
1,562,759	-		PGA1_c15030	0.35	-0.2
1,562,807	+		PGA1_c15030	0.39	-0.3
1,562,807	+		PGA1_c15030	0.39	-0.4
1,562,810	-		PGA1_c15030	0.40	+0.1
1,562,837	-		PGA1_c15030	0.42	-1.0
1,562,861	-		PGA1_c15030	0.45	+0.3
1,562,896	+		PGA1_c15030	0.48	+0.1
1,562,904	-		PGA1_c15030	0.49	-0.7
1,562,965	+		PGA1_c15030	0.55	-0.1
1,562,965	+		PGA1_c15030	0.55	+0.1
1,562,973	-		PGA1_c15030	0.55	+0.4
1,563,014	+		PGA1_c15030	0.59	-0.9
1,563,033	-		PGA1_c15030	0.61	-1.3
1,563,054	+		PGA1_c15030	0.63	-0.1
1,563,072	+		PGA1_c15030	0.65	+0.8
1,563,072	+		PGA1_c15030	0.65	-0.7
1,563,080	-		PGA1_c15030	0.66	-1.2
1,563,127	-		PGA1_c15030	0.70	+0.7
1,563,144	+		PGA1_c15030	0.72	+0.5
1,563,158	-		PGA1_c15030	0.73	+0.8