Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12150

Experiment: m.b. D-Cycloserine 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.0625 mg/ml
1,260,218	+		PGA1_c12130	0.53	+0.2
1,260,218	+		PGA1_c12130	0.53	-0.9
1,260,244	-		PGA1_c12130	0.55	-0.9
1,260,249	+		PGA1_c12130	0.55	+0.4
1,260,378	-		PGA1_c12130	0.65	-2.0
1,260,431	-		PGA1_c12130	0.69	-0.7
1,260,457	+		PGA1_c12130	0.71	-1.1
1,260,457	+		PGA1_c12130	0.71	+0.2
1,260,498	+		PGA1_c12130	0.74	-0.9
1,260,501	-		PGA1_c12130	0.74	+0.6
1,260,595	+		PGA1_c12130	0.81	+1.0
1,260,609	+		PGA1_c12130	0.82	+0.4
1,260,668	-		PGA1_c12130	0.87	+0.0
1,260,793	+				-0.7
1,260,793	+				+0.8
1,260,793	+				-0.4
1,260,799	+				+0.9
1,260,799	+				-2.1
1,260,801	-				-0.9
1,260,801	-				+0.2
1,260,807	-				-0.6
1,260,884	+				-1.1
1,260,940	+		PGA1_c12140	0.19	-1.9
1,260,955	+		PGA1_c12140	0.24	-0.3
1,261,014	-		PGA1_c12140	0.41	+0.5
1,261,058	+		PGA1_c12140	0.54	+0.7
1,261,084	-		PGA1_c12140	0.61	-0.5
1,261,114	+		PGA1_c12140	0.70	-1.7
1,261,145	-		PGA1_c12140	0.79	+0.5
1,261,145	-		PGA1_c12140	0.79	+0.3
1,261,151	+		PGA1_c12140	0.81	-0.7
1,261,151	+		PGA1_c12140	0.81	-1.2
1,261,159	-		PGA1_c12140	0.83	-0.9
1,261,159	-		PGA1_c12140	0.83	+0.5
1,261,161	+		PGA1_c12140	0.84	-1.1
1,261,161	+		PGA1_c12140	0.84	+0.4
1,261,193	+				-0.1
1,261,200	+				+0.3
1,261,329	+		PGA1_c12150	0.11	+0.1
1,261,329	+		PGA1_c12150	0.11	-0.1
1,261,329	+		PGA1_c12150	0.11	+1.0
1,261,337	-		PGA1_c12150	0.12	+0.2
1,261,337	-		PGA1_c12150	0.12	+0.8
1,261,339	-		PGA1_c12150	0.12	+1.3
1,261,386	-		PGA1_c12150	0.16	+0.3
1,261,391	-		PGA1_c12150	0.17	+0.3
1,261,391	-		PGA1_c12150	0.17	+0.4
1,261,489	+		PGA1_c12150	0.26	+0.5
1,261,525	+		PGA1_c12150	0.30	+0.1
1,261,535	-		PGA1_c12150	0.31	+0.9
1,261,535	-		PGA1_c12150	0.31	+0.8
1,261,535	-		PGA1_c12150	0.31	+1.1
1,261,535	-		PGA1_c12150	0.31	-0.9
1,261,546	+		PGA1_c12150	0.32	+0.7
1,261,658	-		PGA1_c12150	0.42	+1.0
1,261,681	+		PGA1_c12150	0.44	+0.7
1,261,693	+		PGA1_c12150	0.45	+0.1
1,261,693	+		PGA1_c12150	0.45	-0.1
1,261,701	-		PGA1_c12150	0.46	-0.2
1,261,715	-		PGA1_c12150	0.47	+0.7
1,261,717	+		PGA1_c12150	0.48	+1.2
1,261,717	+		PGA1_c12150	0.48	-0.5
1,261,725	-		PGA1_c12150	0.48	-0.2
1,261,747	-		PGA1_c12150	0.51	+1.6
1,261,839	+		PGA1_c12150	0.59	+0.2
1,261,839	+		PGA1_c12150	0.59	+0.3
1,261,989	-		PGA1_c12150	0.73	+0.9
1,261,989	-		PGA1_c12150	0.73	-0.3
1,262,024	+		PGA1_c12150	0.77	+0.2
1,262,085	+		PGA1_c12150	0.82	-0.2
1,262,114	+		PGA1_c12150	0.85	-0.3
1,262,144	+		PGA1_c12150	0.88	+0.4
1,262,240	-				-0.1
1,262,255	-				+2.0
1,262,264	+				-1.2
1,262,264	+				-0.2
1,262,322	+		PGA1_c12160	0.16	+0.4
1,262,324	-		PGA1_c12160	0.17	-0.5
1,262,330	-		PGA1_c12160	0.19	+0.3
1,262,401	+		PGA1_c12160	0.40	-1.7
1,262,404	-		PGA1_c12160	0.40	-0.1
1,262,409	-		PGA1_c12160	0.42	-0.1
1,262,409	-		PGA1_c12160	0.42	-1.2
1,262,409	-		PGA1_c12160	0.42	-0.0
1,262,409	-		PGA1_c12160	0.42	-2.5
1,262,409	-		PGA1_c12160	0.42	-0.2
1,262,437	+		PGA1_c12160	0.50	+0.6
1,262,437	+		PGA1_c12160	0.50	+1.4
1,262,612	+				-1.8
1,262,612	+				+1.5
1,262,612	+				+0.3
1,262,620	-				-0.9
1,262,620	-				+0.7
1,262,620	-				+0.3
1,262,625	+				-0.6
1,262,668	+				-0.1
1,262,721	+				+1.1
1,262,745	+				+0.2
1,262,797	-				-0.3
1,262,859	+				-0.1
1,262,902	-				+0.2
1,262,922	-		PGA1_c12170	0.10	+0.7
1,262,927	-		PGA1_c12170	0.11	-0.3
1,262,946	+		PGA1_c12170	0.12	+1.3
1,262,993	-		PGA1_c12170	0.15	+0.1
1,263,014	+		PGA1_c12170	0.16	+0.5
1,263,030	+		PGA1_c12170	0.17	+0.5
1,263,030	+		PGA1_c12170	0.17	+0.8
1,263,032	+		PGA1_c12170	0.17	+0.4
1,263,038	-		PGA1_c12170	0.18	+0.7
1,263,200	+		PGA1_c12170	0.28	-0.3