Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3137 and DvMF_3138 overlap by 4 nucleotides DvMF_3138 and DvMF_3139 are separated by 6 nucleotides DvMF_3139 and DvMF_3140 are separated by 335 nucleotides
DvMF_3137: DvMF_3137 - ABC transporter related (RefSeq), at 3,957,156 to 3,957,989
_3137
DvMF_3138: DvMF_3138 - cobalt ABC transporter, inner membrane subunit CbiQ (RefSeq), at 3,957,986 to 3,958,783
_3138
DvMF_3139: DvMF_3139 - cobalt transport protein CbiM (RefSeq), at 3,958,790 to 3,959,404
_3139
DvMF_3140: DvMF_3140 - Citrate transporter (RefSeq), at 3,959,740 to 3,961,173
_3140
Position (kb)
3957
3958
3959 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3957.020 kb on + strand at 3957.039 kb on - strand at 3957.171 kb on - strand at 3957.243 kb on - strand, within DvMF_3137 at 3957.308 kb on + strand, within DvMF_3137 at 3957.384 kb on + strand, within DvMF_3137 at 3957.384 kb on + strand, within DvMF_3137 at 3957.663 kb on + strand, within DvMF_3137 at 3957.837 kb on + strand, within DvMF_3137 at 3958.045 kb on + strand at 3958.045 kb on + strand at 3958.053 kb on - strand at 3958.139 kb on - strand, within DvMF_3138 at 3958.363 kb on - strand, within DvMF_3138 at 3958.832 kb on + strand at 3959.000 kb on + strand, within DvMF_3139 at 3959.083 kb on - strand, within DvMF_3139 at 3959.124 kb on + strand, within DvMF_3139 at 3959.399 kb on + strand at 3959.474 kb on + strand at 3959.629 kb on + strand at 3959.652 kb on + strand at 3959.750 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 3,957,020 + -1.7 3,957,039 - -0.7 3,957,171 - -0.5 3,957,243 - DvMF_3137 0.10 +0.4 3,957,308 + DvMF_3137 0.18 +0.6 3,957,384 + DvMF_3137 0.27 +0.4 3,957,384 + DvMF_3137 0.27 +1.6 3,957,663 + DvMF_3137 0.61 -2.4 3,957,837 + DvMF_3137 0.82 -0.8 3,958,045 + -1.2 3,958,045 + +0.9 3,958,053 - -0.2 3,958,139 - DvMF_3138 0.19 -1.2 3,958,363 - DvMF_3138 0.47 -3.6 3,958,832 + -0.2 3,959,000 + DvMF_3139 0.34 +1.5 3,959,083 - DvMF_3139 0.48 +0.4 3,959,124 + DvMF_3139 0.54 +0.2 3,959,399 + -0.1 3,959,474 + +0.6 3,959,629 + -0.5 3,959,652 + -1.2 3,959,750 - -0.4
Or see this region's nucleotide sequence