Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2697

Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2696 and DvMF_2697 overlap by 7 nucleotidesDvMF_2697 and DvMF_2698 are separated by 2 nucleotides DvMF_2696: DvMF_2696 - glycosyl transferase family 2 (RefSeq), at 3,411,353 to 3,412,444 _2696 DvMF_2697: DvMF_2697 - acyltransferase 3 (RefSeq), at 3,412,438 to 3,413,529 _2697 DvMF_2698: DvMF_2698 - methyltransferase FkbM family (RefSeq), at 3,413,532 to 3,415,271 _2698 Position (kb) 3412 3413 3414Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3412.332 kb on - strand, within DvMF_2696at 3412.344 kb on - strandat 3412.972 kb on + strand, within DvMF_2697at 3413.578 kb on - strandat 3413.837 kb on + strand, within DvMF_2698at 3413.975 kb on - strand, within DvMF_2698at 3414.303 kb on + strand, within DvMF_2698at 3414.403 kb on - strand, within DvMF_2698at 3414.456 kb on - strand, within DvMF_2698

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml
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3,412,332 - DvMF_2696 0.90 +0.3
3,412,344 - +1.3
3,412,972 + DvMF_2697 0.49 -2.1
3,413,578 - +0.2
3,413,837 + DvMF_2698 0.18 +0.8
3,413,975 - DvMF_2698 0.25 +0.6
3,414,303 + DvMF_2698 0.44 +0.0
3,414,403 - DvMF_2698 0.50 +3.1
3,414,456 - DvMF_2698 0.53 -0.6

Or see this region's nucleotide sequence