Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2589 and DvMF_2590 are separated by 595 nucleotides DvMF_2590 and DvMF_2591 are separated by 165 nucleotides DvMF_2591 and DvMF_2592 are separated by 109 nucleotides
DvMF_2589: DvMF_2589 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 3,273,801 to 3,274,532
_2589
DvMF_2590: DvMF_2590 - response regulator receiver protein (RefSeq), at 3,275,128 to 3,275,523
_2590
DvMF_2591: DvMF_2591 - transcriptional regulator, BadM/Rrf2 family (RefSeq), at 3,275,689 to 3,276,141
_2591
DvMF_2592: DvMF_2592 - two component transcriptional regulator, Fis family (RefSeq), at 3,276,251 to 3,276,637
_2592
Position (kb)
3275
3276 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3274.189 kb on - strand, within DvMF_2589 at 3274.282 kb on + strand, within DvMF_2589 at 3274.331 kb on + strand, within DvMF_2589 at 3274.415 kb on + strand, within DvMF_2589 at 3274.433 kb on + strand, within DvMF_2589 at 3274.433 kb on + strand, within DvMF_2589 at 3274.433 kb on + strand, within DvMF_2589 at 3274.441 kb on - strand, within DvMF_2589 at 3274.523 kb on - strand at 3274.603 kb on - strand at 3274.653 kb on - strand at 3274.754 kb on - strand at 3274.885 kb on + strand at 3275.145 kb on + strand at 3275.145 kb on + strand at 3275.145 kb on + strand at 3275.317 kb on - strand, within DvMF_2590 at 3275.591 kb on - strand at 3275.595 kb on - strand at 3275.687 kb on + strand at 3275.695 kb on - strand at 3275.736 kb on + strand, within DvMF_2591 at 3275.812 kb on + strand, within DvMF_2591 at 3275.869 kb on + strand, within DvMF_2591 at 3276.448 kb on + strand, within DvMF_2592
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 3,274,189 - DvMF_2589 0.53 -1.7 3,274,282 + DvMF_2589 0.66 -1.7 3,274,331 + DvMF_2589 0.72 -1.1 3,274,415 + DvMF_2589 0.84 -0.3 3,274,433 + DvMF_2589 0.86 -0.2 3,274,433 + DvMF_2589 0.86 -0.1 3,274,433 + DvMF_2589 0.86 -1.7 3,274,441 - DvMF_2589 0.87 -1.1 3,274,523 - -0.3 3,274,603 - +0.1 3,274,653 - -0.2 3,274,754 - -2.2 3,274,885 + -0.8 3,275,145 + -1.6 3,275,145 + -1.1 3,275,145 + -0.8 3,275,317 - DvMF_2590 0.48 -2.0 3,275,591 - -0.6 3,275,595 - -0.4 3,275,687 + -1.2 3,275,695 - -0.3 3,275,736 + DvMF_2591 0.10 +1.8 3,275,812 + DvMF_2591 0.27 -1.1 3,275,869 + DvMF_2591 0.40 -0.7 3,276,448 + DvMF_2592 0.51 -0.5
Or see this region's nucleotide sequence