Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2486 and DvMF_2487 overlap by 4 nucleotides DvMF_2487 and DvMF_2488 are separated by 5 nucleotides DvMF_2488 and DvMF_2489 are separated by 169 nucleotides
DvMF_2486: DvMF_2486 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,138,605 to 3,139,561
_2486
DvMF_2487: DvMF_2487 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,139,558 to 3,140,505
_2487
DvMF_2488: DvMF_2488 - phosphate binding protein (RefSeq), at 3,140,511 to 3,141,353
_2488
DvMF_2489: DvMF_2489 - diguanylate cyclase (RefSeq), at 3,141,523 to 3,144,033
_2489
Position (kb)
3140
3141
3142 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3139.698 kb on - strand, within DvMF_2487 at 3139.725 kb on + strand, within DvMF_2487 at 3139.993 kb on + strand, within DvMF_2487 at 3140.025 kb on + strand, within DvMF_2487 at 3140.025 kb on + strand, within DvMF_2487 at 3140.035 kb on - strand, within DvMF_2487 at 3140.298 kb on - strand, within DvMF_2487 at 3140.340 kb on - strand, within DvMF_2487 at 3140.368 kb on + strand, within DvMF_2487 at 3140.403 kb on - strand, within DvMF_2487 at 3140.487 kb on + strand at 3140.525 kb on - strand at 3140.619 kb on - strand, within DvMF_2488 at 3140.754 kb on - strand, within DvMF_2488 at 3141.231 kb on + strand, within DvMF_2488 at 3141.540 kb on + strand at 3141.540 kb on + strand at 3141.540 kb on + strand at 3141.548 kb on - strand at 3141.548 kb on - strand at 3141.548 kb on - strand at 3141.636 kb on - strand at 3141.701 kb on - strand at 3141.863 kb on + strand, within DvMF_2489 at 3141.864 kb on - strand, within DvMF_2489 at 3142.177 kb on + strand, within DvMF_2489
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 3,139,698 - DvMF_2487 0.15 -0.8 3,139,725 + DvMF_2487 0.18 -0.1 3,139,993 + DvMF_2487 0.46 -2.9 3,140,025 + DvMF_2487 0.49 -0.3 3,140,025 + DvMF_2487 0.49 -0.8 3,140,035 - DvMF_2487 0.50 -0.8 3,140,298 - DvMF_2487 0.78 -2.1 3,140,340 - DvMF_2487 0.82 -0.8 3,140,368 + DvMF_2487 0.85 -1.0 3,140,403 - DvMF_2487 0.89 -0.8 3,140,487 + -0.8 3,140,525 - -3.5 3,140,619 - DvMF_2488 0.13 -1.4 3,140,754 - DvMF_2488 0.29 -1.2 3,141,231 + DvMF_2488 0.85 -1.9 3,141,540 + -3.1 3,141,540 + +0.7 3,141,540 + -0.7 3,141,548 - +1.0 3,141,548 - +1.6 3,141,548 - +0.7 3,141,636 - -1.9 3,141,701 - -1.7 3,141,863 + DvMF_2489 0.14 -0.8 3,141,864 - DvMF_2489 0.14 -0.2 3,142,177 + DvMF_2489 0.26 -3.9
Or see this region's nucleotide sequence