Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2326 and DvMF_2327 are separated by 211 nucleotides DvMF_2327 and DvMF_2328 are separated by 336 nucleotides
DvMF_2326: DvMF_2326 - TPR repeat-containing protein (RefSeq), at 2,930,828 to 2,931,592
_2326
DvMF_2327: DvMF_2327 - pyridine nucleotide-disulfide oxidoreductase family protein (RefSeq), at 2,931,804 to 2,933,087
_2327
DvMF_2328: DvMF_2328 - glycosyl transferase group 1 (RefSeq), at 2,933,424 to 2,936,039
_2328
Position (kb)
2931
2932
2933
2934 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2931.200 kb on + strand, within DvMF_2326 at 2931.503 kb on + strand, within DvMF_2326 at 2931.582 kb on + strand at 2931.590 kb on - strand at 2931.612 kb on + strand at 2931.620 kb on - strand at 2931.690 kb on + strand at 2931.768 kb on + strand at 2931.773 kb on + strand at 2931.788 kb on + strand at 2932.090 kb on - strand, within DvMF_2327 at 2932.094 kb on + strand, within DvMF_2327 at 2932.134 kb on + strand, within DvMF_2327 at 2932.139 kb on + strand, within DvMF_2327 at 2932.183 kb on + strand, within DvMF_2327 at 2932.191 kb on - strand, within DvMF_2327 at 2932.256 kb on - strand, within DvMF_2327 at 2932.345 kb on + strand, within DvMF_2327 at 2932.390 kb on + strand, within DvMF_2327 at 2932.543 kb on + strand, within DvMF_2327 at 2932.571 kb on - strand, within DvMF_2327 at 2932.709 kb on - strand, within DvMF_2327 at 2933.203 kb on + strand at 2933.211 kb on - strand at 2933.213 kb on + strand at 2933.216 kb on - strand at 2933.465 kb on - strand at 2933.766 kb on - strand, within DvMF_2328 at 2933.989 kb on + strand, within DvMF_2328 at 2933.989 kb on + strand, within DvMF_2328 at 2933.997 kb on - strand, within DvMF_2328 at 2934.014 kb on + strand, within DvMF_2328
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 2,931,200 + DvMF_2326 0.49 -0.3 2,931,503 + DvMF_2326 0.88 -0.7 2,931,582 + -0.6 2,931,590 - -0.1 2,931,612 + -0.7 2,931,620 - -1.4 2,931,690 + +0.4 2,931,768 + -4.9 2,931,773 + -1.0 2,931,788 + -0.9 2,932,090 - DvMF_2327 0.22 -0.6 2,932,094 + DvMF_2327 0.23 -2.8 2,932,134 + DvMF_2327 0.26 -0.6 2,932,139 + DvMF_2327 0.26 -2.5 2,932,183 + DvMF_2327 0.30 -1.0 2,932,191 - DvMF_2327 0.30 -0.8 2,932,256 - DvMF_2327 0.35 -2.6 2,932,345 + DvMF_2327 0.42 -1.4 2,932,390 + DvMF_2327 0.46 -0.6 2,932,543 + DvMF_2327 0.58 -1.5 2,932,571 - DvMF_2327 0.60 -1.9 2,932,709 - DvMF_2327 0.70 -0.6 2,933,203 + +0.0 2,933,211 - -1.8 2,933,213 + -0.5 2,933,216 - +0.9 2,933,465 - -1.4 2,933,766 - DvMF_2328 0.13 -4.2 2,933,989 + DvMF_2328 0.22 -0.1 2,933,989 + DvMF_2328 0.22 -1.1 2,933,997 - DvMF_2328 0.22 -0.3 2,934,014 + DvMF_2328 0.23 -0.9
Or see this region's nucleotide sequence