Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2253 and DvMF_2254 overlap by 10 nucleotides DvMF_2254 and DvMF_2255 are separated by 71 nucleotides DvMF_2255 and DvMF_2256 are separated by 426 nucleotides
DvMF_2253: DvMF_2253 - Precorrin-8X methylmutase CbiC/CobH (RefSeq), at 2,832,064 to 2,832,801
_2253
DvMF_2254: DvMF_2254 - cobyrinic acid a,c-diamide synthase (RefSeq), at 2,832,792 to 2,834,408
_2254
DvMF_2255: DvMF_2255 - hypothetical protein (RefSeq), at 2,834,480 to 2,834,737
_2255
DvMF_2256: DvMF_2256 - transcriptional regulator, MucR family (RefSeq), at 2,835,164 to 2,835,556
_2256
Position (kb)
2832
2833
2834
2835 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2832.042 kb on - strand at 2832.062 kb on + strand at 2832.341 kb on + strand, within DvMF_2253 at 2832.612 kb on - strand, within DvMF_2253 at 2832.612 kb on - strand, within DvMF_2253 at 2833.069 kb on - strand, within DvMF_2254 at 2833.251 kb on + strand, within DvMF_2254 at 2833.685 kb on + strand, within DvMF_2254 at 2833.790 kb on + strand, within DvMF_2254 at 2834.437 kb on + strand at 2834.858 kb on + strand at 2835.181 kb on + strand at 2835.269 kb on - strand, within DvMF_2256
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 2,832,042 - -2.0 2,832,062 + -0.8 2,832,341 + DvMF_2253 0.38 -0.4 2,832,612 - DvMF_2253 0.74 -3.5 2,832,612 - DvMF_2253 0.74 -1.1 2,833,069 - DvMF_2254 0.17 -2.7 2,833,251 + DvMF_2254 0.28 -4.2 2,833,685 + DvMF_2254 0.55 -0.7 2,833,790 + DvMF_2254 0.62 -0.8 2,834,437 + -0.8 2,834,858 + -0.8 2,835,181 + -1.5 2,835,269 - DvMF_2256 0.27 -1.2
Or see this region's nucleotide sequence