Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2177 and DvMF_2178 are separated by 242 nucleotides DvMF_2178 and DvMF_2179 are separated by 184 nucleotides DvMF_2179 and DvMF_2180 are separated by 391 nucleotides
DvMF_2177: DvMF_2177 - Hydantoinase/oxoprolinase (RefSeq), at 2,714,835 to 2,716,832
_2177
DvMF_2178: DvMF_2178 - export-related chaperone CsaA (RefSeq), at 2,717,075 to 2,717,440
_2178
DvMF_2179: DvMF_2179 - Methyltransferase type 11 (RefSeq), at 2,717,625 to 2,718,539
_2179
DvMF_2180: DvMF_2180 - metallo-beta-lactamase/flavodoxin domain-containing protein (RefSeq), at 2,718,931 to 2,720,124
_2180
Position (kb)
2717
2718
2719 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2716.641 kb on + strand at 2716.750 kb on + strand at 2716.759 kb on - strand at 2716.909 kb on - strand at 2717.091 kb on - strand at 2717.127 kb on + strand, within DvMF_2178 at 2717.322 kb on + strand, within DvMF_2178 at 2717.478 kb on + strand at 2717.756 kb on + strand, within DvMF_2179 at 2717.874 kb on - strand, within DvMF_2179 at 2718.216 kb on - strand, within DvMF_2179 at 2718.375 kb on + strand, within DvMF_2179 at 2718.721 kb on + strand at 2719.182 kb on + strand, within DvMF_2180 at 2719.360 kb on - strand, within DvMF_2180 at 2719.362 kb on - strand, within DvMF_2180 at 2719.440 kb on + strand, within DvMF_2180 at 2719.494 kb on - strand, within DvMF_2180
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 2,716,641 + -1.8 2,716,750 + -0.9 2,716,759 - -0.8 2,716,909 - -2.0 2,717,091 - -4.4 2,717,127 + DvMF_2178 0.14 -0.7 2,717,322 + DvMF_2178 0.67 +0.5 2,717,478 + -0.7 2,717,756 + DvMF_2179 0.14 -1.1 2,717,874 - DvMF_2179 0.27 +0.2 2,718,216 - DvMF_2179 0.65 -0.7 2,718,375 + DvMF_2179 0.82 -2.1 2,718,721 + +0.2 2,719,182 + DvMF_2180 0.21 +0.6 2,719,360 - DvMF_2180 0.36 -0.7 2,719,362 - DvMF_2180 0.36 -1.3 2,719,440 + DvMF_2180 0.43 -1.0 2,719,494 - DvMF_2180 0.47 -1.3
Or see this region's nucleotide sequence