Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2051 and DvMF_2052 are separated by 232 nucleotides DvMF_2052 and DvMF_2053 are separated by 209 nucleotides
DvMF_2051: DvMF_2051 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (RefSeq), at 2,543,183 to 2,544,430
_2051
DvMF_2052: DvMF_2052 - hypothetical protein (RefSeq), at 2,544,663 to 2,545,223
_2052
DvMF_2053: DvMF_2053 - S-adenosylmethionine/tRNA-ribosyltransferase- isomerase (RefSeq), at 2,545,433 to 2,546,686
_2053
Position (kb)
2544
2545
2546 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2544.459 kb on - strand at 2544.490 kb on - strand at 2544.492 kb on + strand at 2544.500 kb on - strand at 2544.519 kb on + strand at 2544.572 kb on - strand at 2544.683 kb on - strand at 2544.771 kb on - strand, within DvMF_2052 at 2544.798 kb on - strand, within DvMF_2052 at 2544.826 kb on - strand, within DvMF_2052 at 2544.829 kb on + strand, within DvMF_2052 at 2544.837 kb on - strand, within DvMF_2052 at 2544.837 kb on - strand, within DvMF_2052 at 2544.931 kb on - strand, within DvMF_2052 at 2544.933 kb on - strand, within DvMF_2052 at 2544.966 kb on - strand, within DvMF_2052 at 2545.039 kb on + strand, within DvMF_2052 at 2545.047 kb on - strand, within DvMF_2052 at 2545.058 kb on - strand, within DvMF_2052 at 2545.233 kb on - strand at 2545.233 kb on - strand at 2545.233 kb on - strand at 2545.419 kb on - strand at 2545.427 kb on + strand at 2545.427 kb on + strand at 2545.613 kb on + strand, within DvMF_2053 at 2545.671 kb on - strand, within DvMF_2053 at 2545.730 kb on + strand, within DvMF_2053 at 2545.804 kb on - strand, within DvMF_2053 at 2545.897 kb on - strand, within DvMF_2053 at 2546.068 kb on + strand, within DvMF_2053 at 2546.136 kb on - strand, within DvMF_2053 at 2546.151 kb on - strand, within DvMF_2053 at 2546.158 kb on + strand, within DvMF_2053 at 2546.161 kb on - strand, within DvMF_2053 at 2546.196 kb on + strand, within DvMF_2053
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 2,544,459 - -1.7 2,544,490 - -0.4 2,544,492 + -0.8 2,544,500 - -3.3 2,544,519 + -0.6 2,544,572 - -0.0 2,544,683 - +0.5 2,544,771 - DvMF_2052 0.19 -1.1 2,544,798 - DvMF_2052 0.24 +0.2 2,544,826 - DvMF_2052 0.29 +0.3 2,544,829 + DvMF_2052 0.30 -0.4 2,544,837 - DvMF_2052 0.31 -0.2 2,544,837 - DvMF_2052 0.31 -0.2 2,544,931 - DvMF_2052 0.48 -0.2 2,544,933 - DvMF_2052 0.48 -0.2 2,544,966 - DvMF_2052 0.54 +0.3 2,545,039 + DvMF_2052 0.67 -0.2 2,545,047 - DvMF_2052 0.68 -0.4 2,545,058 - DvMF_2052 0.70 -0.1 2,545,233 - -0.8 2,545,233 - +0.9 2,545,233 - -1.5 2,545,419 - +0.8 2,545,427 + -0.6 2,545,427 + -0.2 2,545,613 + DvMF_2053 0.14 -2.5 2,545,671 - DvMF_2053 0.19 -2.0 2,545,730 + DvMF_2053 0.24 -1.1 2,545,804 - DvMF_2053 0.30 +0.4 2,545,897 - DvMF_2053 0.37 -1.5 2,546,068 + DvMF_2053 0.51 -0.4 2,546,136 - DvMF_2053 0.56 -0.7 2,546,151 - DvMF_2053 0.57 -0.6 2,546,158 + DvMF_2053 0.58 -0.1 2,546,161 - DvMF_2053 0.58 -0.8 2,546,196 + DvMF_2053 0.61 -1.6
Or see this region's nucleotide sequence