Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1892 and DvMF_1893 overlap by 4 nucleotides DvMF_1893 and DvMF_1894 are separated by 143 nucleotides DvMF_1894 and DvMF_1895 are separated by 156 nucleotides
DvMF_1892: DvMF_1892 - CMP-N-acetylneuraminic acid synthetase (RefSeq), at 2,328,895 to 2,330,853
_1892
DvMF_1893: DvMF_1893 - acylneuraminate cytidylyltransferase (RefSeq), at 2,330,850 to 2,331,545
_1893
DvMF_1894: DvMF_1894 - N-acylneuraminate-9-phosphate synthase (RefSeq), at 2,331,689 to 2,332,753
_1894
DvMF_1895: DvMF_1895 - hypothetical protein (RefSeq), at 2,332,910 to 2,334,592
_1895
Position (kb)
2331
2332
2333 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2330.709 kb on - strand at 2330.734 kb on + strand at 2330.892 kb on + strand at 2330.947 kb on - strand, within DvMF_1893 at 2331.145 kb on - strand, within DvMF_1893 at 2331.257 kb on + strand, within DvMF_1893 at 2331.373 kb on + strand, within DvMF_1893 at 2331.378 kb on + strand, within DvMF_1893 at 2331.405 kb on - strand, within DvMF_1893 at 2331.420 kb on - strand, within DvMF_1893 at 2331.584 kb on + strand at 2331.687 kb on - strand at 2331.898 kb on + strand, within DvMF_1894 at 2332.027 kb on - strand, within DvMF_1894 at 2332.458 kb on - strand, within DvMF_1894 at 2332.667 kb on - strand at 2332.844 kb on - strand at 2333.054 kb on - strand at 2333.109 kb on - strand, within DvMF_1895 at 2333.129 kb on - strand, within DvMF_1895 at 2333.204 kb on - strand, within DvMF_1895 at 2333.487 kb on + strand, within DvMF_1895 at 2333.490 kb on - strand, within DvMF_1895 at 2333.690 kb on - strand, within DvMF_1895 at 2333.707 kb on + strand, within DvMF_1895 at 2333.715 kb on - strand, within DvMF_1895
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 2,330,709 - -0.9 2,330,734 + -0.5 2,330,892 + -1.4 2,330,947 - DvMF_1893 0.14 -3.1 2,331,145 - DvMF_1893 0.42 -0.7 2,331,257 + DvMF_1893 0.58 -1.0 2,331,373 + DvMF_1893 0.75 -3.8 2,331,378 + DvMF_1893 0.76 -3.9 2,331,405 - DvMF_1893 0.80 -2.0 2,331,420 - DvMF_1893 0.82 -2.7 2,331,584 + +0.3 2,331,687 - -2.2 2,331,898 + DvMF_1894 0.20 -4.5 2,332,027 - DvMF_1894 0.32 -0.3 2,332,458 - DvMF_1894 0.72 -2.1 2,332,667 - -0.6 2,332,844 - -1.7 2,333,054 - -4.5 2,333,109 - DvMF_1895 0.12 -3.9 2,333,129 - DvMF_1895 0.13 -2.0 2,333,204 - DvMF_1895 0.17 -0.3 2,333,487 + DvMF_1895 0.34 -2.2 2,333,490 - DvMF_1895 0.34 -4.0 2,333,690 - DvMF_1895 0.46 -1.7 2,333,707 + DvMF_1895 0.47 -2.1 2,333,715 - DvMF_1895 0.48 -1.0
Or see this region's nucleotide sequence