Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1843 and DvMF_1844 are separated by 177 nucleotides DvMF_1844 and DvMF_1845 overlap by 16 nucleotides
DvMF_1843: DvMF_1843 - acetyltransferase (RefSeq), at 2,255,115 to 2,255,783
_1843
DvMF_1844: DvMF_1844 - acylneuraminate cytidylyltransferase (RefSeq), at 2,255,961 to 2,256,725
_1844
DvMF_1845: DvMF_1845 - N-acylneuraminate-9-phosphate synthase (RefSeq), at 2,256,710 to 2,257,744
_1845
Position (kb)
2255
2256
2257 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2255.091 kb on + strand at 2255.121 kb on + strand at 2255.126 kb on - strand at 2255.184 kb on + strand, within DvMF_1843 at 2255.497 kb on + strand, within DvMF_1843 at 2255.546 kb on - strand, within DvMF_1843 at 2255.631 kb on + strand, within DvMF_1843 at 2255.703 kb on - strand, within DvMF_1843 at 2256.017 kb on - strand at 2256.125 kb on + strand, within DvMF_1844 at 2256.130 kb on + strand, within DvMF_1844 at 2256.142 kb on + strand, within DvMF_1844 at 2256.822 kb on - strand, within DvMF_1845 at 2256.953 kb on + strand, within DvMF_1845 at 2256.998 kb on + strand, within DvMF_1845 at 2257.050 kb on + strand, within DvMF_1845 at 2257.068 kb on - strand, within DvMF_1845 at 2257.190 kb on + strand, within DvMF_1845 at 2257.229 kb on + strand, within DvMF_1845 at 2257.463 kb on - strand, within DvMF_1845 at 2257.510 kb on - strand, within DvMF_1845 at 2257.510 kb on - strand, within DvMF_1845 at 2257.556 kb on + strand, within DvMF_1845 at 2257.598 kb on - strand, within DvMF_1845 at 2257.601 kb on + strand, within DvMF_1845 at 2257.601 kb on + strand, within DvMF_1845 at 2257.609 kb on - strand, within DvMF_1845
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 2,255,091 + -0.8 2,255,121 + -0.9 2,255,126 - +1.3 2,255,184 + DvMF_1843 0.10 -0.2 2,255,497 + DvMF_1843 0.57 -1.0 2,255,546 - DvMF_1843 0.64 -0.1 2,255,631 + DvMF_1843 0.77 -0.8 2,255,703 - DvMF_1843 0.88 -1.5 2,256,017 - +0.9 2,256,125 + DvMF_1844 0.21 +0.6 2,256,130 + DvMF_1844 0.22 -0.3 2,256,142 + DvMF_1844 0.24 +0.1 2,256,822 - DvMF_1845 0.11 +0.1 2,256,953 + DvMF_1845 0.23 -0.1 2,256,998 + DvMF_1845 0.28 +0.9 2,257,050 + DvMF_1845 0.33 +0.0 2,257,068 - DvMF_1845 0.35 -0.6 2,257,190 + DvMF_1845 0.46 -0.3 2,257,229 + DvMF_1845 0.50 +1.2 2,257,463 - DvMF_1845 0.73 -0.4 2,257,510 - DvMF_1845 0.77 -1.5 2,257,510 - DvMF_1845 0.77 -0.6 2,257,556 + DvMF_1845 0.82 -0.3 2,257,598 - DvMF_1845 0.86 -4.8 2,257,601 + DvMF_1845 0.86 +0.1 2,257,601 + DvMF_1845 0.86 -1.2 2,257,609 - DvMF_1845 0.87 -0.1
Or see this region's nucleotide sequence