Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1790 and DvMF_1791 are separated by 228 nucleotides DvMF_1791 and DvMF_1792 are separated by 0 nucleotides
DvMF_1790: DvMF_1790 - CDP-diacylglycerol/serine O-phosphatidyltransferase (RefSeq), at 2,189,904 to 2,190,653
_1790
DvMF_1791: DvMF_1791 - 2-isopropylmalate synthase (RefSeq), at 2,190,882 to 2,192,426
_1791
DvMF_1792: DvMF_1792 - 3-isopropylmalate dehydratase large subunit (RefSeq), at 2,192,427 to 2,193,683
_1792
Position (kb)
2190
2191
2192
2193 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2190.647 kb on + strand at 2190.713 kb on + strand at 2190.860 kb on - strand at 2191.060 kb on - strand, within DvMF_1791 at 2191.090 kb on + strand, within DvMF_1791 at 2191.098 kb on - strand, within DvMF_1791 at 2191.238 kb on - strand, within DvMF_1791 at 2191.420 kb on - strand, within DvMF_1791 at 2191.664 kb on - strand, within DvMF_1791 at 2191.861 kb on - strand, within DvMF_1791 at 2192.047 kb on + strand, within DvMF_1791 at 2192.079 kb on + strand, within DvMF_1791 at 2192.184 kb on + strand, within DvMF_1791 at 2192.194 kb on - strand, within DvMF_1791 at 2192.629 kb on - strand, within DvMF_1792 at 2192.659 kb on + strand, within DvMF_1792 at 2192.752 kb on + strand, within DvMF_1792 at 2192.770 kb on - strand, within DvMF_1792 at 2192.931 kb on + strand, within DvMF_1792 at 2192.941 kb on - strand, within DvMF_1792 at 2192.947 kb on + strand, within DvMF_1792 at 2193.206 kb on + strand, within DvMF_1792 at 2193.383 kb on + strand, within DvMF_1792
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 2,190,647 + +1.2 2,190,713 + -4.4 2,190,860 - -0.5 2,191,060 - DvMF_1791 0.12 -2.5 2,191,090 + DvMF_1791 0.13 -2.0 2,191,098 - DvMF_1791 0.14 -1.6 2,191,238 - DvMF_1791 0.23 -2.2 2,191,420 - DvMF_1791 0.35 -3.1 2,191,664 - DvMF_1791 0.51 -4.1 2,191,861 - DvMF_1791 0.63 -1.8 2,192,047 + DvMF_1791 0.75 -1.9 2,192,079 + DvMF_1791 0.77 -0.8 2,192,184 + DvMF_1791 0.84 -0.9 2,192,194 - DvMF_1791 0.85 -1.3 2,192,629 - DvMF_1792 0.16 -1.8 2,192,659 + DvMF_1792 0.18 -4.4 2,192,752 + DvMF_1792 0.26 -0.5 2,192,770 - DvMF_1792 0.27 -2.4 2,192,931 + DvMF_1792 0.40 -1.7 2,192,941 - DvMF_1792 0.41 -1.4 2,192,947 + DvMF_1792 0.41 -5.6 2,193,206 + DvMF_1792 0.62 -0.4 2,193,383 + DvMF_1792 0.76 -2.0
Or see this region's nucleotide sequence