Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1724 and DvMF_1725 are separated by 70 nucleotides DvMF_1725 and DvMF_1726 are separated by 369 nucleotides DvMF_1726 and DvMF_1727 are separated by 172 nucleotides DvMF_1727 and DvMF_1728 overlap by 4 nucleotides
DvMF_1724: DvMF_1724 - no description, at 2,108,666 to 2,108,806
_1724
DvMF_1725: DvMF_1725 - protein of unknown function UPF0150 (RefSeq), at 2,108,877 to 2,109,284
_1725
DvMF_1726: DvMF_1726 - hypothetical protein (RefSeq), at 2,109,654 to 2,109,977
_1726
DvMF_1727: DvMF_1727 - hypothetical protein (RefSeq), at 2,110,150 to 2,110,947
_1727
DvMF_1728: DvMF_1728 - ABC transporter related (RefSeq), at 2,110,944 to 2,111,777
_1728
Position (kb)
2109
2110 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2108.917 kb on + strand at 2108.958 kb on - strand, within DvMF_1725 at 2108.989 kb on + strand, within DvMF_1725 at 2109.034 kb on + strand, within DvMF_1725 at 2109.390 kb on - strand at 2109.571 kb on + strand at 2109.571 kb on + strand at 2109.721 kb on + strand, within DvMF_1726 at 2109.891 kb on + strand, within DvMF_1726 at 2110.212 kb on + strand at 2110.235 kb on - strand, within DvMF_1727 at 2110.580 kb on - strand, within DvMF_1727 at 2110.606 kb on + strand, within DvMF_1727 at 2110.655 kb on - strand, within DvMF_1727 at 2110.778 kb on - strand, within DvMF_1727 at 2110.792 kb on - strand, within DvMF_1727 at 2110.794 kb on + strand, within DvMF_1727
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 2,108,917 + -1.0 2,108,958 - DvMF_1725 0.20 -0.3 2,108,989 + DvMF_1725 0.27 -1.2 2,109,034 + DvMF_1725 0.38 -1.0 2,109,390 - +0.5 2,109,571 + +0.5 2,109,571 + -0.1 2,109,721 + DvMF_1726 0.21 -1.6 2,109,891 + DvMF_1726 0.73 -1.4 2,110,212 + -0.2 2,110,235 - DvMF_1727 0.11 -1.2 2,110,580 - DvMF_1727 0.54 -3.8 2,110,606 + DvMF_1727 0.57 -3.0 2,110,655 - DvMF_1727 0.63 -0.2 2,110,778 - DvMF_1727 0.79 +0.8 2,110,792 - DvMF_1727 0.80 -0.4 2,110,794 + DvMF_1727 0.81 -2.7
Or see this region's nucleotide sequence