Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1682 and DvMF_1683 are separated by 2 nucleotides DvMF_1683 and DvMF_1684 are separated by 16 nucleotides DvMF_1684 and DvMF_1685 are separated by 29 nucleotides DvMF_1685 and DvMF_1686 are separated by 157 nucleotides
DvMF_1682: DvMF_1682 - hypothetical protein (RefSeq), at 2,050,535 to 2,051,584
_1682
DvMF_1683: DvMF_1683 - protein of unknown function DUF1351 (RefSeq), at 2,051,587 to 2,052,486
_1683
DvMF_1684: DvMF_1684 - hypothetical protein (RefSeq), at 2,052,503 to 2,053,411
_1684
DvMF_1685: DvMF_1685 - hypothetical protein (RefSeq), at 2,053,441 to 2,053,764
_1685
DvMF_1686: DvMF_1686 - hypothetical protein (RefSeq), at 2,053,922 to 2,054,101
_1686
Position (kb)
2052
2053
2054 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2051.584 kb on + strand at 2051.885 kb on - strand, within DvMF_1683 at 2051.885 kb on - strand, within DvMF_1683 at 2051.945 kb on + strand, within DvMF_1683 at 2052.005 kb on + strand, within DvMF_1683 at 2052.141 kb on - strand, within DvMF_1683 at 2052.235 kb on + strand, within DvMF_1683 at 2052.248 kb on - strand, within DvMF_1683 at 2052.263 kb on - strand, within DvMF_1683 at 2052.300 kb on + strand, within DvMF_1683 at 2052.345 kb on + strand, within DvMF_1683 at 2052.350 kb on + strand, within DvMF_1683 at 2052.380 kb on + strand, within DvMF_1683 at 2052.412 kb on + strand at 2052.728 kb on + strand, within DvMF_1684 at 2053.030 kb on + strand, within DvMF_1684 at 2053.030 kb on + strand, within DvMF_1684 at 2053.030 kb on + strand, within DvMF_1684 at 2053.030 kb on + strand, within DvMF_1684 at 2053.030 kb on + strand, within DvMF_1684 at 2053.038 kb on - strand, within DvMF_1684 at 2053.038 kb on - strand, within DvMF_1684 at 2053.419 kb on + strand at 2053.419 kb on + strand at 2053.427 kb on - strand at 2053.427 kb on - strand at 2053.578 kb on + strand, within DvMF_1685 at 2053.719 kb on + strand, within DvMF_1685 at 2053.727 kb on - strand, within DvMF_1685 at 2053.737 kb on - strand at 2053.918 kb on - strand at 2053.957 kb on + strand, within DvMF_1686 at 2053.975 kb on - strand, within DvMF_1686 at 2054.261 kb on - strand at 2054.264 kb on + strand at 2054.375 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 2,051,584 + -0.4 2,051,885 - DvMF_1683 0.33 -3.4 2,051,885 - DvMF_1683 0.33 -0.7 2,051,945 + DvMF_1683 0.40 -0.1 2,052,005 + DvMF_1683 0.46 -1.5 2,052,141 - DvMF_1683 0.62 -0.6 2,052,235 + DvMF_1683 0.72 -1.0 2,052,248 - DvMF_1683 0.73 -2.5 2,052,263 - DvMF_1683 0.75 -0.3 2,052,300 + DvMF_1683 0.79 -2.6 2,052,345 + DvMF_1683 0.84 -1.3 2,052,350 + DvMF_1683 0.85 +0.4 2,052,380 + DvMF_1683 0.88 -1.4 2,052,412 + -0.7 2,052,728 + DvMF_1684 0.25 +0.0 2,053,030 + DvMF_1684 0.58 -0.9 2,053,030 + DvMF_1684 0.58 -1.3 2,053,030 + DvMF_1684 0.58 -0.7 2,053,030 + DvMF_1684 0.58 -0.6 2,053,030 + DvMF_1684 0.58 -0.4 2,053,038 - DvMF_1684 0.59 -0.5 2,053,038 - DvMF_1684 0.59 -1.5 2,053,419 + -0.7 2,053,419 + -0.7 2,053,427 - -3.2 2,053,427 - +0.6 2,053,578 + DvMF_1685 0.42 -1.2 2,053,719 + DvMF_1685 0.86 +1.0 2,053,727 - DvMF_1685 0.88 -0.6 2,053,737 - -0.4 2,053,918 - -0.4 2,053,957 + DvMF_1686 0.19 -1.0 2,053,975 - DvMF_1686 0.29 -0.9 2,054,261 - -1.1 2,054,264 + -1.1 2,054,375 + -0.7
Or see this region's nucleotide sequence