Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1640 and DvMF_1641 are separated by 79 nucleotides DvMF_1641 and DvMF_1642 are separated by 2 nucleotides DvMF_1642 and DvMF_1643 are separated by 2 nucleotides
DvMF_1640: DvMF_1640 - hypothetical protein (RefSeq), at 2,021,174 to 2,021,533
_1640
DvMF_1641: DvMF_1641 - hypothetical protein (RefSeq), at 2,021,613 to 2,022,518
_1641
DvMF_1642: DvMF_1642 - hypothetical protein (RefSeq), at 2,022,521 to 2,022,874
_1642
DvMF_1643: DvMF_1643 - phage tape measure protein (RefSeq), at 2,022,877 to 2,025,693
_1643
Position (kb)
2022
2023 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2021.682 kb on - strand at 2021.810 kb on + strand, within DvMF_1641 at 2021.833 kb on - strand, within DvMF_1641 at 2021.904 kb on - strand, within DvMF_1641 at 2022.016 kb on + strand, within DvMF_1641 at 2022.024 kb on - strand, within DvMF_1641 at 2022.120 kb on + strand, within DvMF_1641 at 2022.138 kb on - strand, within DvMF_1641 at 2022.175 kb on - strand, within DvMF_1641 at 2022.175 kb on - strand, within DvMF_1641 at 2022.175 kb on - strand, within DvMF_1641 at 2022.186 kb on - strand, within DvMF_1641 at 2022.238 kb on - strand, within DvMF_1641 at 2022.258 kb on + strand, within DvMF_1641 at 2022.311 kb on - strand, within DvMF_1641 at 2022.334 kb on - strand, within DvMF_1641 at 2022.461 kb on + strand at 2022.514 kb on + strand at 2022.522 kb on - strand at 2022.549 kb on - strand at 2022.654 kb on + strand, within DvMF_1642 at 2022.908 kb on + strand at 2023.079 kb on - strand at 2023.230 kb on + strand, within DvMF_1643 at 2023.292 kb on + strand, within DvMF_1643 at 2023.315 kb on - strand, within DvMF_1643 at 2023.355 kb on + strand, within DvMF_1643 at 2023.574 kb on - strand, within DvMF_1643 at 2023.815 kb on + strand, within DvMF_1643
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 2,021,682 - -0.2 2,021,810 + DvMF_1641 0.22 -0.2 2,021,833 - DvMF_1641 0.24 -1.1 2,021,904 - DvMF_1641 0.32 -1.7 2,022,016 + DvMF_1641 0.44 -1.0 2,022,024 - DvMF_1641 0.45 +0.5 2,022,120 + DvMF_1641 0.56 -0.4 2,022,138 - DvMF_1641 0.58 -1.5 2,022,175 - DvMF_1641 0.62 +0.3 2,022,175 - DvMF_1641 0.62 -0.7 2,022,175 - DvMF_1641 0.62 -0.7 2,022,186 - DvMF_1641 0.63 -0.8 2,022,238 - DvMF_1641 0.69 +0.9 2,022,258 + DvMF_1641 0.71 -1.6 2,022,311 - DvMF_1641 0.77 -2.8 2,022,334 - DvMF_1641 0.80 -1.3 2,022,461 + -0.3 2,022,514 + -1.5 2,022,522 - -1.0 2,022,549 - -0.8 2,022,654 + DvMF_1642 0.38 -4.1 2,022,908 + -0.6 2,023,079 - -1.3 2,023,230 + DvMF_1643 0.13 -0.4 2,023,292 + DvMF_1643 0.15 -1.3 2,023,315 - DvMF_1643 0.16 -1.7 2,023,355 + DvMF_1643 0.17 -1.0 2,023,574 - DvMF_1643 0.25 -0.1 2,023,815 + DvMF_1643 0.33 -2.0
Or see this region's nucleotide sequence