Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1630
Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 with D-Cycloserine 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,008,428 | + | -0.6 | |||
2,008,710 | + | DvMF_1629 | 0.36 | -0.7 | |
2,008,723 | + | DvMF_1629 | 0.37 | -2.4 | |
2,008,839 | + | DvMF_1629 | 0.50 | -1.0 | |
2,009,029 | - | DvMF_1629 | 0.70 | -0.9 | |
2,009,063 | - | DvMF_1629 | 0.73 | -0.8 | |
2,009,162 | - | DvMF_1629 | 0.84 | -0.6 | |
2,009,278 | - | -0.2 | |||
2,009,318 | + | -0.1 | |||
2,009,326 | - | -3.7 | |||
2,009,331 | - | -0.3 | |||
2,009,363 | + | +0.2 | |||
2,009,434 | + | -0.8 | |||
2,009,465 | - | -1.2 | |||
2,009,585 | - | DvMF_1630 | 0.20 | -0.3 | |
2,009,622 | - | DvMF_1630 | 0.23 | -0.3 | |
2,009,863 | - | DvMF_1630 | 0.44 | -2.0 | |
2,009,865 | + | DvMF_1630 | 0.44 | -0.4 | |
2,009,921 | + | DvMF_1630 | 0.49 | -0.4 | |
2,010,724 | + | +0.3 | |||
2,010,864 | + | -4.1 | |||
2,010,872 | - | +0.2 | |||
2,010,872 | - | -0.4 | |||
2,010,874 | + | +0.2 | |||
2,010,921 | - | -4.0 | |||
2,011,028 | - | DvMF_1631 | 0.21 | -0.2 | |
2,011,028 | - | DvMF_1631 | 0.21 | -0.0 | |
2,011,044 | + | DvMF_1631 | 0.23 | -0.0 | |
2,011,208 | + | DvMF_1631 | 0.42 | -4.7 | |
2,011,216 | - | DvMF_1631 | 0.43 | -1.4 | |
2,011,433 | + | DvMF_1631 | 0.70 | +0.1 | |
2,011,473 | - | DvMF_1631 | 0.74 | +1.1 |
Or see this region's nucleotide sequence