Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1510 and DvMF_1511 are separated by 206 nucleotides DvMF_1511 and DvMF_1512 are separated by 146 nucleotides DvMF_1512 and DvMF_1513 are separated by 376 nucleotides
DvMF_1510: DvMF_1510 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 1,861,644 to 1,863,056
_1510
DvMF_1511: DvMF_1511 - hypothetical protein (RefSeq), at 1,863,263 to 1,864,009
_1511
DvMF_1512: DvMF_1512 - endoribonuclease L-PSP (RefSeq), at 1,864,156 to 1,864,542
_1512
DvMF_1513: DvMF_1513 - metal dependent phosphohydrolase (RefSeq), at 1,864,919 to 1,865,803
_1513
Position (kb)
1863
1864
1865 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1862.286 kb on - strand, within DvMF_1510 at 1862.305 kb on - strand, within DvMF_1510 at 1862.437 kb on + strand, within DvMF_1510 at 1862.460 kb on - strand, within DvMF_1510 at 1862.491 kb on - strand, within DvMF_1510 at 1862.540 kb on + strand, within DvMF_1510 at 1862.610 kb on - strand, within DvMF_1510 at 1862.686 kb on - strand, within DvMF_1510 at 1862.938 kb on + strand at 1863.481 kb on + strand, within DvMF_1511 at 1863.631 kb on - strand, within DvMF_1511 at 1863.678 kb on + strand, within DvMF_1511 at 1863.686 kb on - strand, within DvMF_1511 at 1863.817 kb on + strand, within DvMF_1511 at 1863.825 kb on - strand, within DvMF_1511 at 1864.081 kb on - strand at 1864.140 kb on + strand at 1864.167 kb on - strand at 1864.509 kb on - strand at 1865.009 kb on - strand, within DvMF_1513
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 1,862,286 - DvMF_1510 0.45 -0.5 1,862,305 - DvMF_1510 0.47 +0.6 1,862,437 + DvMF_1510 0.56 -3.3 1,862,460 - DvMF_1510 0.58 -0.1 1,862,491 - DvMF_1510 0.60 +0.4 1,862,540 + DvMF_1510 0.63 +0.2 1,862,610 - DvMF_1510 0.68 -0.2 1,862,686 - DvMF_1510 0.74 -0.3 1,862,938 + -1.9 1,863,481 + DvMF_1511 0.29 -0.5 1,863,631 - DvMF_1511 0.49 -0.7 1,863,678 + DvMF_1511 0.56 -3.7 1,863,686 - DvMF_1511 0.57 -2.1 1,863,817 + DvMF_1511 0.74 -2.1 1,863,825 - DvMF_1511 0.75 -2.8 1,864,081 - -0.9 1,864,140 + -0.6 1,864,167 - -0.6 1,864,509 - -0.6 1,865,009 - DvMF_1513 0.10 -2.3
Or see this region's nucleotide sequence