Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1274 and DvMF_1275 are separated by 69 nucleotides DvMF_1275 and DvMF_1276 overlap by 1 nucleotides DvMF_1276 and DvMF_1277 overlap by 1 nucleotides DvMF_1277 and DvMF_1278 overlap by 47 nucleotides DvMF_1278 and DvMF_1279 overlap by 4 nucleotides
DvMF_1274: DvMF_1274 - hypothetical protein (RefSeq), at 1,567,099 to 1,568,001
_1274
DvMF_1275: DvMF_1275 - hypothetical protein (RefSeq), at 1,568,071 to 1,568,472
_1275
DvMF_1276: DvMF_1276 - Lytic transglycosylase catalytic (RefSeq), at 1,568,472 to 1,569,143
_1276
DvMF_1277: DvMF_1277 - hypothetical protein (RefSeq), at 1,569,143 to 1,569,562
_1277
DvMF_1278: DvMF_1278 - hypothetical protein (RefSeq), at 1,569,516 to 1,569,797
_1278
DvMF_1279: DvMF_1279 - hypothetical protein (RefSeq), at 1,569,794 to 1,570,288
_1279
Position (kb)
1568
1569
1570 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1568.278 kb on - strand, within DvMF_1275 at 1568.395 kb on + strand, within DvMF_1275 at 1568.491 kb on - strand at 1568.548 kb on + strand, within DvMF_1276 at 1568.563 kb on - strand, within DvMF_1276 at 1568.618 kb on - strand, within DvMF_1276 at 1568.804 kb on + strand, within DvMF_1276 at 1568.976 kb on - strand, within DvMF_1276 at 1569.083 kb on + strand at 1569.260 kb on - strand, within DvMF_1277 at 1569.308 kb on + strand, within DvMF_1277 at 1569.374 kb on - strand, within DvMF_1277 at 1569.624 kb on - strand, within DvMF_1278 at 1569.643 kb on + strand, within DvMF_1278 at 1569.736 kb on + strand, within DvMF_1278 at 1569.953 kb on - strand, within DvMF_1279 at 1569.964 kb on + strand, within DvMF_1279
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 1,568,278 - DvMF_1275 0.51 -0.4 1,568,395 + DvMF_1275 0.81 +0.8 1,568,491 - -0.7 1,568,548 + DvMF_1276 0.11 -3.1 1,568,563 - DvMF_1276 0.14 +1.2 1,568,618 - DvMF_1276 0.22 -3.0 1,568,804 + DvMF_1276 0.49 -2.3 1,568,976 - DvMF_1276 0.75 -0.8 1,569,083 + -0.1 1,569,260 - DvMF_1277 0.28 -0.5 1,569,308 + DvMF_1277 0.39 -0.5 1,569,374 - DvMF_1277 0.55 -1.3 1,569,624 - DvMF_1278 0.38 -0.6 1,569,643 + DvMF_1278 0.45 -0.1 1,569,736 + DvMF_1278 0.78 -0.9 1,569,953 - DvMF_1279 0.32 -3.0 1,569,964 + DvMF_1279 0.34 -3.4
Or see this region's nucleotide sequence