Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1264 and DvMF_1265 overlap by 4 nucleotides DvMF_1265 and DvMF_1266 are separated by 2 nucleotides DvMF_1266 and DvMF_1267 are separated by 2 nucleotides DvMF_1267 and DvMF_1268 overlap by 1 nucleotides
DvMF_1264: DvMF_1264 - Transposase-like Mu (RefSeq), at 1,560,629 to 1,562,815
_1264
DvMF_1265: DvMF_1265 - bacteriophage DNA transposition B protein, putative (RefSeq), at 1,562,812 to 1,563,513
_1265
DvMF_1266: DvMF_1266 - hypothetical protein (RefSeq), at 1,563,516 to 1,564,160
_1266
DvMF_1267: DvMF_1267 - hypothetical protein (RefSeq), at 1,564,163 to 1,564,372
_1267
DvMF_1268: DvMF_1268 - Mu Gam family protein (RefSeq), at 1,564,372 to 1,564,881
_1268
Position (kb)
1562
1563
1564 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1561.882 kb on - strand, within DvMF_1264 at 1561.911 kb on - strand, within DvMF_1264 at 1561.982 kb on - strand, within DvMF_1264 at 1562.226 kb on + strand, within DvMF_1264 at 1562.233 kb on - strand, within DvMF_1264 at 1562.238 kb on - strand, within DvMF_1264 at 1562.302 kb on - strand, within DvMF_1264 at 1562.313 kb on - strand, within DvMF_1264 at 1562.517 kb on + strand, within DvMF_1264 at 1562.622 kb on - strand at 1562.666 kb on + strand at 1562.666 kb on + strand at 1562.744 kb on + strand at 1562.871 kb on - strand at 1563.010 kb on - strand, within DvMF_1265 at 1563.313 kb on - strand, within DvMF_1265 at 1563.320 kb on - strand, within DvMF_1265 at 1563.488 kb on - strand at 1563.610 kb on + strand, within DvMF_1266 at 1563.618 kb on - strand, within DvMF_1266 at 1563.716 kb on + strand, within DvMF_1266 at 1563.724 kb on + strand, within DvMF_1266 at 1563.724 kb on + strand, within DvMF_1266 at 1563.724 kb on + strand, within DvMF_1266 at 1563.752 kb on - strand, within DvMF_1266 at 1563.907 kb on + strand, within DvMF_1266 at 1563.957 kb on - strand, within DvMF_1266 at 1564.077 kb on - strand, within DvMF_1266 at 1564.128 kb on - strand at 1564.185 kb on - strand, within DvMF_1267 at 1564.380 kb on + strand at 1564.388 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 1,561,882 - DvMF_1264 0.57 -0.1 1,561,911 - DvMF_1264 0.59 -0.5 1,561,982 - DvMF_1264 0.62 -2.1 1,562,226 + DvMF_1264 0.73 -0.8 1,562,233 - DvMF_1264 0.73 -0.4 1,562,238 - DvMF_1264 0.74 -0.2 1,562,302 - DvMF_1264 0.76 -1.0 1,562,313 - DvMF_1264 0.77 -2.8 1,562,517 + DvMF_1264 0.86 -0.6 1,562,622 - -0.7 1,562,666 + -2.7 1,562,666 + -0.6 1,562,744 + -0.2 1,562,871 - -1.0 1,563,010 - DvMF_1265 0.28 -1.8 1,563,313 - DvMF_1265 0.71 -5.1 1,563,320 - DvMF_1265 0.72 -1.3 1,563,488 - -0.8 1,563,610 + DvMF_1266 0.15 -0.3 1,563,618 - DvMF_1266 0.16 -0.9 1,563,716 + DvMF_1266 0.31 +0.5 1,563,724 + DvMF_1266 0.32 -1.1 1,563,724 + DvMF_1266 0.32 +1.2 1,563,724 + DvMF_1266 0.32 +0.2 1,563,752 - DvMF_1266 0.37 -0.9 1,563,907 + DvMF_1266 0.61 -1.7 1,563,957 - DvMF_1266 0.68 -1.1 1,564,077 - DvMF_1266 0.87 -0.7 1,564,128 - +0.3 1,564,185 - DvMF_1267 0.10 -0.2 1,564,380 + +0.9 1,564,388 - -1.0
Or see this region's nucleotide sequence