Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1213
Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 with D-Cycloserine 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,490,937 | + | -0.8 | |||
1,491,182 | + | -0.2 | |||
1,491,389 | - | -0.8 | |||
1,491,902 | + | +0.0 | |||
1,491,923 | + | -0.7 | |||
1,492,001 | + | DvMF_1213 | 0.11 | +0.8 | |
1,492,067 | - | DvMF_1213 | 0.16 | -0.7 | |
1,492,155 | + | DvMF_1213 | 0.21 | -0.7 | |
1,492,354 | + | DvMF_1213 | 0.33 | -1.0 | |
1,492,479 | - | DvMF_1213 | 0.41 | -0.6 | |
1,492,479 | - | DvMF_1213 | 0.41 | -0.6 | |
1,492,482 | - | DvMF_1213 | 0.41 | +0.2 | |
1,492,655 | - | DvMF_1213 | 0.52 | -0.4 | |
1,492,870 | + | DvMF_1213 | 0.66 | -1.2 | |
1,492,870 | + | DvMF_1213 | 0.66 | -0.5 | |
1,492,989 | - | DvMF_1213 | 0.73 | -0.9 | |
1,493,078 | - | DvMF_1213 | 0.79 | -1.8 | |
1,493,393 | + | -1.5 | |||
1,493,406 | - | +0.1 | |||
1,493,820 | - | +0.4 | |||
1,494,007 | + | DvMF_1214 | 0.18 | -1.0 | |
1,494,077 | + | DvMF_1214 | 0.22 | -1.0 | |
1,494,127 | - | DvMF_1214 | 0.25 | -2.8 |
Or see this region's nucleotide sequence