Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0908
Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoLS4 with D-Cycloserine 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,091,520 | - | DvMF_0907 | 0.67 | -0.8 | |
| 1,091,662 | - | DvMF_0907 | 0.78 | -2.2 | |
| 1,091,729 | - | DvMF_0907 | 0.83 | -0.7 | |
| 1,092,095 | - | -1.1 | |||
| 1,092,180 | + | -3.4 | |||
| 1,092,285 | + | -0.3 | |||
| 1,092,295 | + | -0.7 | |||
| 1,092,303 | + | +0.8 | |||
| 1,092,303 | - | +0.2 | |||
| 1,092,563 | + | -5.6 | |||
| 1,092,568 | + | -1.1 | |||
| 1,092,571 | - | -2.2 | |||
| 1,092,871 | - | DvMF_0908 | 0.31 | -5.5 | |
| 1,092,874 | + | DvMF_0908 | 0.32 | -4.3 | |
| 1,092,884 | + | DvMF_0908 | 0.32 | -2.5 | |
| 1,093,008 | - | DvMF_0908 | 0.43 | -1.9 | |
| 1,093,037 | - | DvMF_0908 | 0.46 | -2.7 | |
| 1,093,190 | - | DvMF_0908 | 0.59 | -4.3 | |
| 1,093,387 | + | DvMF_0908 | 0.76 | -2.2 | |
| 1,093,427 | + | DvMF_0908 | 0.79 | -0.7 | |
| 1,093,497 | + | DvMF_0908 | 0.85 | -1.4 | |
| 1,093,573 | + | -3.2 | |||
| 1,093,696 | + | -0.7 | |||
| 1,093,928 | + | DvMF_0909 | 0.27 | -0.5 | |
| 1,094,251 | + | DvMF_0909 | 0.76 | -0.9 | |
| 1,094,272 | + | DvMF_0909 | 0.80 | +0.3 |
Or see this region's nucleotide sequence