Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0730 and DvMF_0731 are separated by 142 nucleotides DvMF_0731 and DvMF_0732 are separated by 141 nucleotides DvMF_0732 and DvMF_0733 overlap by 4 nucleotides
DvMF_0730: DvMF_0730 - phage head morphogenesis protein, SPP1 gp7 family (RefSeq), at 879,276 to 880,529
_0730
DvMF_0731: DvMF_0731 - phage virion morphogenesis protein (RefSeq), at 880,672 to 881,154
_0731
DvMF_0732: DvMF_0732 - hypothetical protein (RefSeq), at 881,296 to 881,886
_0732
DvMF_0733: DvMF_0733 - hypothetical protein (RefSeq), at 881,883 to 882,815
_0733
Position (kb) 880
881
882 Strain fitness (log2 ratio) -2
-1
0
1 at 879.682 kb on - strand, within DvMF_0730 at 879.790 kb on - strand, within DvMF_0730 at 879.832 kb on + strand, within DvMF_0730 at 879.972 kb on - strand, within DvMF_0730 at 879.972 kb on - strand, within DvMF_0730 at 880.030 kb on + strand, within DvMF_0730 at 880.081 kb on - strand, within DvMF_0730 at 880.145 kb on + strand, within DvMF_0730 at 880.880 kb on - strand, within DvMF_0731 at 880.906 kb on - strand, within DvMF_0731 at 881.203 kb on + strand at 881.211 kb on - strand at 881.386 kb on + strand, within DvMF_0732 at 882.092 kb on - strand, within DvMF_0733
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 879,682 - DvMF_0730 0.32 -1.8 879,790 - DvMF_0730 0.41 -0.4 879,832 + DvMF_0730 0.44 -0.7 879,972 - DvMF_0730 0.56 -0.2 879,972 - DvMF_0730 0.56 -0.2 880,030 + DvMF_0730 0.60 -0.6 880,081 - DvMF_0730 0.64 -0.1 880,145 + DvMF_0730 0.69 -1.6 880,880 - DvMF_0731 0.43 -2.0 880,906 - DvMF_0731 0.48 -1.1 881,203 + -0.1 881,211 - -2.2 881,386 + DvMF_0732 0.15 -0.5 882,092 - DvMF_0733 0.22 +0.9
Or see this region's nucleotide sequence