Experiment: MoLS4 with D-Cycloserine 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0562 and DvMF_0563 are separated by 491 nucleotides DvMF_0563 and DvMF_0564 are separated by 102 nucleotides DvMF_0564 and aspA overlap by 4 nucleotides
DvMF_0562: DvMF_0562 - dihydrodipicolinate synthase (RefSeq), at 661,492 to 662,370
_0562
DvMF_0563: DvMF_0563 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 662,862 to 665,171
_0563
DvMF_0564: DvMF_0564 - cyclase family protein (RefSeq), at 665,274 to 666,008
_0564
DvMF_0565: aspA - aspartate ammonia-lyase (RefSeq), at 666,005 to 667,570
aspA
Position (kb) 662
663
664
665
666 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 662.420 kb on - strand at 662.865 kb on + strand at 663.035 kb on - strand at 663.107 kb on - strand, within DvMF_0563 at 663.110 kb on - strand, within DvMF_0563 at 663.415 kb on - strand, within DvMF_0563 at 663.418 kb on + strand, within DvMF_0563 at 663.462 kb on + strand, within DvMF_0563 at 663.550 kb on - strand, within DvMF_0563 at 663.569 kb on - strand, within DvMF_0563 at 663.593 kb on + strand, within DvMF_0563 at 663.601 kb on - strand, within DvMF_0563 at 663.792 kb on + strand, within DvMF_0563 at 664.202 kb on + strand, within DvMF_0563 at 664.950 kb on + strand at 665.226 kb on + strand at 665.257 kb on + strand at 665.378 kb on - strand, within DvMF_0564 at 665.414 kb on + strand, within DvMF_0564 at 665.593 kb on + strand, within DvMF_0564 at 665.884 kb on - strand, within DvMF_0564 at 665.884 kb on - strand, within DvMF_0564 at 666.028 kb on + strand at 666.063 kb on - strand at 666.089 kb on + strand at 666.110 kb on - strand at 666.147 kb on + strand at 666.149 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.0625 mg/ml remove 662,420 - +0.3 662,865 + -0.2 663,035 - -0.3 663,107 - DvMF_0563 0.11 -1.4 663,110 - DvMF_0563 0.11 -0.4 663,415 - DvMF_0563 0.24 -1.0 663,418 + DvMF_0563 0.24 -2.1 663,462 + DvMF_0563 0.26 -0.5 663,550 - DvMF_0563 0.30 -2.4 663,569 - DvMF_0563 0.31 -1.1 663,593 + DvMF_0563 0.32 -1.0 663,601 - DvMF_0563 0.32 -1.6 663,792 + DvMF_0563 0.40 -0.5 664,202 + DvMF_0563 0.58 -0.9 664,950 + -0.6 665,226 + -0.4 665,257 + -2.7 665,378 - DvMF_0564 0.14 -1.1 665,414 + DvMF_0564 0.19 -3.4 665,593 + DvMF_0564 0.43 -1.2 665,884 - DvMF_0564 0.83 -1.0 665,884 - DvMF_0564 0.83 -0.7 666,028 + +1.1 666,063 - -0.6 666,089 + -3.1 666,110 - -0.3 666,147 + +1.0 666,149 + -0.3
Or see this region's nucleotide sequence